Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | R8611_RS08555 | Genome accession | NZ_AP026927 |
| Coordinates | 1697663..1698622 (+) | Length | 319 a.a. |
| NCBI ID | WP_000778475.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700178 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1692663..1703622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8611_RS08525 (PC0174_16910) | - | 1692780..1693544 (-) | 765 | WP_000082879.1 | nuclear transport factor 2 family protein | - |
| R8611_RS08530 (PC0174_16920) | - | 1693548..1693991 (-) | 444 | WP_000655202.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| R8611_RS08535 (PC0174_16930) | - | 1694673..1694969 (-) | 297 | WP_000840137.1 | bacteriocin immunity protein | - |
| R8611_RS08540 (PC0174_16940) | pepA | 1694991..1696055 (-) | 1065 | WP_000209199.1 | glutamyl aminopeptidase | - |
| R8611_RS08545 (PC0174_16950) | galE | 1696455..1697156 (+) | 702 | WP_050199581.1 | UDP-glucose 4-epimerase GalE | - |
| R8611_RS08550 (PC0174_16960) | - | 1697172..1697366 (+) | 195 | WP_001838026.1 | hypothetical protein | - |
| R8611_RS08555 (PC0174_16970) | ceuB | 1697663..1698622 (+) | 960 | WP_000778475.1 | ABC transporter permease | Machinery gene |
| R8611_RS08560 (PC0174_16980) | - | 1698612..1699568 (+) | 957 | WP_001193669.1 | iron chelate uptake ABC transporter family permease subunit | - |
| R8611_RS08565 (PC0174_16990) | - | 1699565..1700317 (+) | 753 | WP_044811513.1 | ABC transporter ATP-binding protein | - |
| R8611_RS08570 (PC0174_17000) | - | 1700413..1701378 (+) | 966 | WP_317647913.1 | siderophore ABC transporter substrate-binding protein | - |
| R8611_RS08575 (PC0174_17010) | yidD | 1701603..1701845 (-) | 243 | WP_000821640.1 | membrane protein insertion efficiency factor YidD | - |
| R8611_RS08580 (PC0174_17020) | - | 1701845..1702567 (-) | 723 | WP_001222228.1 | pseudouridine synthase | - |
| R8611_RS08585 (PC0174_17030) | scpB | 1702554..1703123 (-) | 570 | WP_000105310.1 | SMC-Scp complex subunit ScpB | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 35391.28 Da Isoelectric Point: 9.2573
>NTDB_id=82953 R8611_RS08555 WP_000778475.1 1697663..1698622(+) (ceuB) [Streptococcus pneumoniae strain PZ900700178]
MKLSYYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKCYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
MKLSYYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKCYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
Nucleotide
Download Length: 960 bp
>NTDB_id=82953 R8611_RS08555 WP_000778475.1 1697663..1698622(+) (ceuB) [Streptococcus pneumoniae strain PZ900700178]
ATGAAACTTTCTTATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGTGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
ATGAAACTTTCTTATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGTGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
37.419 |
97.179 |
0.364 |