Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | H7679_RS03810 | Genome accession | NZ_AP023392 |
| Coordinates | 753690..754643 (+) | Length | 317 a.a. |
| NCBI ID | WP_024395874.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain DAT300 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 748690..759643
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7679_RS03795 (DAT300_07030) | - | 749539..750576 (-) | 1038 | WP_044676476.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| H7679_RS03800 (DAT300_07040) | - | 750876..751469 (-) | 594 | WP_024395872.1 | DUF1361 domain-containing protein | - |
| H7679_RS03805 (DAT300_07050) | metG | 751625..753628 (+) | 2004 | WP_024395873.1 | methionine--tRNA ligase | - |
| H7679_RS03810 (DAT300_07060) | coiA | 753690..754643 (+) | 954 | WP_024395874.1 | competence protein CoiA | Machinery gene |
| H7679_RS03815 (DAT300_07070) | - | 754687..755052 (+) | 366 | WP_014637766.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H7679_RS03820 (DAT300_07080) | HI0659 | 755042..755341 (+) | 300 | WP_014637767.1 | helix-turn-helix domain-containing protein | Machinery gene |
| H7679_RS03825 (DAT300_07090) | pepF | 755451..757253 (+) | 1803 | WP_024395875.1 | oligoendopeptidase F | Regulator |
| H7679_RS03830 (DAT300_07100) | - | 757255..757698 (+) | 444 | WP_024395876.1 | hypothetical protein | - |
| H7679_RS03835 (DAT300_07110) | - | 757709..758257 (+) | 549 | WP_024395877.1 | DUF6630 family protein | - |
| H7679_RS03840 (DAT300_07120) | - | 758332..759051 (+) | 720 | WP_050573105.1 | O-methyltransferase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36721.35 Da Isoelectric Point: 8.2802
>NTDB_id=82948 H7679_RS03810 WP_024395874.1 753690..754643(+) (coiA) [Streptococcus suis strain DAT300]
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLYILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAESYSRGENVLTKTAEEWYPHIRLPRSAIGFAQIQKDLSPVYQDFDQYYAEVKDKRIQAVYPPAVYWKISRIKE
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLYILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAESYSRGENVLTKTAEEWYPHIRLPRSAIGFAQIQKDLSPVYQDFDQYYAEVKDKRIQAVYPPAVYWKISRIKE
Nucleotide
Download Length: 954 bp
>NTDB_id=82948 H7679_RS03810 WP_024395874.1 753690..754643(+) (coiA) [Streptococcus suis strain DAT300]
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCTTGTCC
AGGTTGTGGAGGACTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTAACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCAGCCCAGCATCTGTCACTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCCGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGTCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTCCA
ATGTTCCAGTCTGCCCATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCATGAAGCTGGTCTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTATGGATAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCACGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGTACATCTTGCGTCTGCCTTTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATGTGCTGACAAAGACGGCAGAAGAATGGTATCCCCACATCCGTCT
GCCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAAGTCCAGTCTATCAGGATTTTGACCAGTATTATGCGG
AGGTCAAGGACAAGCGGATACAAGCGGTTTATCCACCAGCAGTTTATTGGAAAATAAGTAGAATAAAAGAATGA
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCTTGTCC
AGGTTGTGGAGGACTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTAACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCAGCCCAGCATCTGTCACTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCCGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGTCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTCCA
ATGTTCCAGTCTGCCCATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCATGAAGCTGGTCTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTATGGATAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCACGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGTACATCTTGCGTCTGCCTTTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATGTGCTGACAAAGACGGCAGAAGAATGGTATCCCCACATCCGTCT
GCCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAAGTCCAGTCTATCAGGATTTTGACCAGTATTATGCGG
AGGTCAAGGACAAGCGGATACAAGCGGTTTATCCACCAGCAGTTTATTGGAAAATAAGTAGAATAAAAGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Streptococcus mitis NCTC 12261 |
53.226 |
97.792 |
0.521 |
| coiA | Streptococcus pneumoniae TIGR4 |
50.968 |
97.792 |
0.498 |
| coiA | Streptococcus pneumoniae Rx1 |
50.968 |
97.792 |
0.498 |
| coiA | Streptococcus pneumoniae D39 |
50.968 |
97.792 |
0.498 |
| coiA | Streptococcus pneumoniae R6 |
50.968 |
97.792 |
0.498 |
| coiA | Lactococcus lactis subsp. cremoris KW2 |
40.312 |
100 |
0.407 |