Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QJ050_RS20785 | Genome accession | NZ_CP124840 |
| Coordinates | 4500659..4500979 (-) | Length | 106 a.a. |
| NCBI ID | WP_021140625.1 | Uniprot ID | T0QN50 |
| Organism | Aeromonas salmonicida strain 29 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4495659..4505979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJ050_RS20765 (QJ050_20765) | - | 4495941..4496639 (-) | 699 | WP_058395949.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| QJ050_RS20770 (QJ050_20770) | - | 4496995..4497966 (+) | 972 | WP_011898383.1 | response regulator | - |
| QJ050_RS20775 (QJ050_20775) | - | 4498042..4499439 (-) | 1398 | WP_169047469.1 | peptide MFS transporter | - |
| QJ050_RS20780 (QJ050_20780) | galU | 4499653..4500564 (-) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| QJ050_RS20785 (QJ050_20785) | comEA | 4500659..4500979 (-) | 321 | WP_021140625.1 | ComEA family DNA-binding protein | Machinery gene |
| QJ050_RS20790 (QJ050_20790) | cysQ | 4501147..4501917 (+) | 771 | WP_282789733.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| QJ050_RS20795 (QJ050_20795) | - | 4501999..4502295 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| QJ050_RS20800 (QJ050_20800) | - | 4502322..4502873 (-) | 552 | WP_005318063.1 | septation protein A | - |
| QJ050_RS20805 (QJ050_20805) | - | 4502959..4504494 (-) | 1536 | WP_282789734.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| QJ050_RS20810 (QJ050_20810) | - | 4504719..4505354 (+) | 636 | WP_021140622.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11211.08 Da Isoelectric Point: 9.6863
>NTDB_id=828301 QJ050_RS20785 WP_021140625.1 4500659..4500979(-) (comEA) [Aeromonas salmonicida strain 29]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=828301 QJ050_RS20785 WP_021140625.1 4500659..4500979(-) (comEA) [Aeromonas salmonicida strain 29]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAGGGGATCGGAGAGAAAAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAGGGGATCGGAGAGAAAAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
51.818 |
100 |
0.538 |
| comEA | Vibrio cholerae C6706 |
51.818 |
100 |
0.538 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |