Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | H7674_RS01765 | Genome accession | NZ_AP023388 |
| Coordinates | 335428..335919 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain NIH35 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 330428..340919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7674_RS01735 (SPNIH35_02940) | - | 331717..332217 (+) | 501 | WP_021340895.1 | phosphatase PAP2 family protein | - |
| H7674_RS01740 (SPNIH35_02950) | trxA | 332280..332612 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| H7674_RS01745 | - | 332664..333252 (-) | 589 | Protein_297 | helix-turn-helix domain-containing protein | - |
| H7674_RS01750 (SPNIH35_02980) | mutY | 333328..334482 (-) | 1155 | WP_011285126.1 | A/G-specific adenine glycosylase | - |
| H7674_RS01755 | - | 334650..334943 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| H7674_RS01760 (SPNIH35_02990) | rpsF | 335116..335406 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| H7674_RS01765 (SPNIH35_03000) | ssb | 335428..335919 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| H7674_RS01770 (SPNIH35_03010) | rpsR | 336084..336323 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| H7674_RS01775 (SPNIH35_03020) | - | 336456..337112 (-) | 657 | WP_011285125.1 | DUF1129 domain-containing protein | - |
| H7674_RS01780 (SPNIH35_03030) | - | 337245..338189 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=82725 H7674_RS01765 WP_002983122.1 335428..335919(+) (ssb) [Streptococcus pyogenes strain NIH35]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=82725 H7674_RS01765 WP_002983122.1 335428..335919(+) (ssb) [Streptococcus pyogenes strain NIH35]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |