Detailed information NTG0826545

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QIU11_RS02055
• Genome accession: NZ_CP124600
• Coordinates: 442588..443736 (+)
• Length: 382 a.a.
• NCBI ID: WP_058177574.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain Li010
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 437588..448736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIU11_RS02030 (QIU11_02030)	-	438739..439035 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
QIU11_RS02035 (QIU11_02035)	-	439032..439625 (-)	594	WP_003155373.1	YggT family protein	-
QIU11_RS02040 (QIU11_02040)	proC	439636..440457 (-)	822	WP_003142635.1	pyrroline-5-carboxylate reductase	-
QIU11_RS02045 (QIU11_02045)	-	440469..441161 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
QIU11_RS02050 (QIU11_02050)	pilT	441376..442410 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
QIU11_RS02055 (QIU11_02055)	pilU	442588..443736 (+)	1149	WP_058177574.1	type IV pilus ATPase PilU	Machinery gene
QIU11_RS02060 (QIU11_02060)	czcD	443744..444643 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
QIU11_RS02065 (QIU11_02065)	-	444797..445201 (+)	405	WP_003084560.1	NINE protein	-
QIU11_RS02070 (QIU11_02070)	-	445444..446817 (+)	1374	WP_003084562.1	pyridoxal-phosphate dependent enzyme	-
QIU11_RS02075 (QIU11_02075)	-	446814..447998 (+)	1185	WP_003100953.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42558.84 Da
• Isoelectric Point: 6.7258

>NTDB_id=826545 QIU11_RS02055 WP_058177574.1 442588..443736(+) (pilU) [Pseudomonas aeruginosa strain Li010]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVYELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=826545 QIU11_RS02055 WP_058177574.1 442588..443736(+) (pilU) [Pseudomonas aeruginosa strain Li010]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACTTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGTACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGTCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.22	100	0.882
pilU	Acinetobacter baylyi ADP1	65.546	93.455	0.613
pilU	Vibrio cholerae strain A1552	60	91.623	0.55
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382