Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | R8635_RS00110 | Genome accession | NZ_AP026924 |
| Coordinates | 21282..21518 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | A0A0H2ZMA7 |
| Organism | Streptococcus pneumoniae strain PZ900700063 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 16282..26518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8635_RS00105 | - | 20235..21016 (-) | 782 | Protein_14 | transposase | - |
| R8635_RS00110 (PC0062_00160) | comW | 21282..21518 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| R8635_RS00115 (PC0062_00170) | - | 21749..23035 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| R8635_RS00120 (PC0062_00180) | tadA | 23236..23703 (+) | 468 | WP_000291870.1 | tRNA adenosine(34) deaminase TadA | - |
| R8635_RS00130 (PC0062_00190) | - | 23912..25048 (-) | 1137 | WP_224757251.1 | site-specific integrase | - |
| R8635_RS00135 (PC0062_00200) | - | 25173..25523 (-) | 351 | WP_001020945.1 | hypothetical protein | - |
| R8635_RS00140 (PC0062_00210) | - | 25537..25917 (-) | 381 | WP_000136430.1 | ImmA/IrrE family metallo-endopeptidase | - |
| R8635_RS00145 (PC0062_00220) | - | 25939..26295 (-) | 357 | WP_000153672.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=82507 R8635_RS00110 WP_000939545.1 21282..21518(+) (comW) [Streptococcus pneumoniae strain PZ900700063]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=82507 R8635_RS00110 WP_000939545.1 21282..21518(+) (comW) [Streptococcus pneumoniae strain PZ900700063]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTAAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTAAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |