Detailed information NTG0822826

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QG728_RS04580
• Genome accession: NZ_CP123854
• Coordinates: 942230..943348 (+)
• Length: 372 a.a.
• NCBI ID: WP_262094296.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain WB4
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 937230..948348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QG728_RS04570 (QG728_04570)	-	940345..941037 (-)	693	WP_001108508.1	YggS family pyridoxal phosphate-dependent enzyme	-
QG728_RS04575 (QG728_04575)	pilT	941165..942202 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
QG728_RS04580 (QG728_04580)	pilU	942230..943348 (+)	1119	WP_262094296.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
QG728_RS04585 (QG728_04585)	fur	943418..943855 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
QG728_RS04590 (QG728_04590)	bamE	943967..944365 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
QG728_RS04595 (QG728_04595)	-	944420..944743 (-)	324	WP_000442585.1	RnfH family protein	-
QG728_RS04600 (QG728_04600)	-	944743..945810 (-)	1068	WP_002084046.1	hypothetical protein	-
QG728_RS04605 (QG728_04605)	-	945963..946418 (-)	456	WP_000782976.1	bacteriohemerythrin	-
QG728_RS04610 (QG728_04610)	-	946671..947519 (-)	849	WP_000336551.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41847.08 Da
• Isoelectric Point: 6.8289

>NTDB_id=822826 QG728_RS04580 WP_262094296.1 942230..943348(+) (pilU) [Acinetobacter baumannii strain WB4]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTGSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=822826 QG728_RS04580 WP_262094296.1 942230..943348(+) (pilU) [Acinetobacter baumannii strain WB4]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCAGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGGCTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCACCAGATGTCATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGTCACCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTTGACCGT
ATTATTCACTTTTTTGAAAGTGATCGTCACAGCCAGCTTTACATGGATTTGTCACTTAACTTAAAGGCTATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.022	98.925	0.683
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392