Detailed information NTG0822777

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: NRK31_RS13670
• Genome accession: NZ_CP123852
• Coordinates: 2764289..2764759 (+)
• Length: 156 a.a.
• NCBI ID: WP_000934769.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 5812R
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2759289..2769759

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NRK31_RS13630	-	2759327..2759554 (-)	228	WP_000801108.1	hypothetical protein	-
NRK31_RS13635	-	2759613..2759933 (+)	321	WP_001798161.1	DUF771 domain-containing protein	-
NRK31_RS13640	-	2759930..2760091 (+)	162	WP_000066020.1	DUF1270 domain-containing protein	-
NRK31_RS13645	-	2760184..2760444 (+)	261	WP_000291488.1	DUF1108 family protein	-
NRK31_RS13650	-	2760453..2760716 (+)	264	WP_042727568.1	hypothetical protein	-
NRK31_RS13655	-	2760713..2762668 (+)	1956	WP_001813910.1	AAA family ATPase	-
NRK31_RS13660	-	2762670..2763590 (+)	921	WP_000138475.1	recombinase RecT	-
NRK31_RS13665	-	2763671..2764288 (+)	618	WP_071621397.1	MBL fold metallo-hydrolase	-
NRK31_RS13670	ssbA	2764289..2764759 (+)	471	WP_000934769.1	single-stranded DNA-binding protein	Machinery gene
NRK31_RS13675	-	2764789..2765682 (+)	894	WP_000148329.1	DnaD domain-containing protein	-
NRK31_RS13680	-	2765689..2765907 (+)	219	WP_000338528.1	hypothetical protein	-
NRK31_RS13685	-	2765916..2766320 (+)	405	WP_000401964.1	RusA family crossover junction endodeoxyribonuclease	-
NRK31_RS13690	-	2766333..2766701 (+)	369	WP_000101270.1	SA1788 family PVL leukocidin-associated protein	-
NRK31_RS13695	-	2766705..2766947 (+)	243	WP_000131377.1	phi PVL orf 51-like protein	-
NRK31_RS13700	-	2766961..2767347 (+)	387	WP_000693615.1	hypothetical protein	-
NRK31_RS13705	-	2767344..2767538 (+)	195	WP_000983954.1	hypothetical protein	-
NRK31_RS13710	-	2767535..2767984 (+)	450	WP_000982708.1	YopX family protein	-
NRK31_RS13715	-	2767981..2768265 (+)	285	WP_001105621.1	hypothetical protein	-
NRK31_RS13720	-	2768258..2768506 (+)	249	WP_001065083.1	DUF1024 family protein	-
NRK31_RS13725	-	2768499..2769035 (+)	537	WP_000185669.1	dUTP diphosphatase	-
NRK31_RS13730	-	2769072..2769278 (+)	207	WP_000195810.1	DUF1381 domain-containing protein	-
NRK31_RS13735	-	2769275..2769424 (+)	150	WP_000595267.1	hypothetical protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17671.55 Da
• Isoelectric Point: 5.2672

>NTDB_id=822777 NRK31_RS13670 WP_000934769.1 2764289..2764759(+) (ssbA) [Staphylococcus aureus strain 5812R]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=822777 NRK31_RS13670 WP_000934769.1 2764289..2764759(+) (ssbA) [Staphylococcus aureus strain 5812R]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.367	100	0.628
ssb	Latilactobacillus sakei subsp. sakei 23K	50.588	100	0.551
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	67.949	0.404
ssb	Glaesserella parasuis strain SC1401	32.203	100	0.365