Detailed information
Overview
| Name | pilR | Type | Regulator |
| Locus tag | QAO71_RS04595 | Genome accession | NZ_CP123445 |
| Coordinates | 953948..955288 (-) | Length | 446 a.a. |
| NCBI ID | WP_235818283.1 | Uniprot ID | - |
| Organism | Halopseudomonas sp. SMJS2 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 948948..960288
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO71_RS04580 (QAO71_04580) | - | 950307..951053 (+) | 747 | WP_280165377.1 | transporter substrate-binding domain-containing protein | - |
| QAO71_RS04585 (QAO71_04585) | mqo | 951112..952599 (-) | 1488 | WP_280165378.1 | malate dehydrogenase (quinone) | - |
| QAO71_RS04590 (QAO71_04590) | thiO | 952749..953855 (+) | 1107 | WP_280165379.1 | glycine oxidase ThiO | - |
| QAO71_RS04595 (QAO71_04595) | pilR | 953948..955288 (-) | 1341 | WP_235818283.1 | sigma-54 dependent transcriptional regulator | Regulator |
| QAO71_RS04600 (QAO71_04600) | pilS | 955326..956918 (-) | 1593 | WP_036990733.1 | ATP-binding protein | Regulator |
| QAO71_RS04605 (QAO71_04605) | - | 956899..957129 (-) | 231 | WP_280165380.1 | PP0621 family protein | - |
| QAO71_RS04610 (QAO71_04610) | - | 957391..958395 (-) | 1005 | WP_036991184.1 | outer membrane protein assembly factor BamD | - |
| QAO71_RS04615 (QAO71_04615) | rluD | 958567..959526 (+) | 960 | WP_136869229.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| QAO71_RS04620 (QAO71_04620) | pgeF | 959523..960260 (+) | 738 | WP_280165381.1 | peptidoglycan editing factor PgeF | - |
Sequence
Protein
Download Length: 446 a.a. Molecular weight: 49578.88 Da Isoelectric Point: 5.5372
>NTDB_id=821128 QAO71_RS04595 WP_235818283.1 953948..955288(-) (pilR) [Halopseudomonas sp. SMJS2]
MNNPLALIIDDEPDILELLDMTLGRMNISTRSATSLGQALELLNQQHFDLCLTDMRLPDGDGLSVVRHIQQHCPNTPVAM
ITAYGSLDTAITALKSGAFDFVTKPVDLQRLRELVNGALRLNQRQEAPLIEESDDPIQGSSPPIQQLRRQIAKLARSEAP
LYISGESGSGKELVARRIHALGPRACHPFVPVNCGAIPSELMESEFFGHRKGSFTGAVADKPGLFQAASGGTLFLDEVAD
LPLAMQVKLLRAIQEKAVRPVGTQQEQPVNVRLLCATHKDLAVEVAEGRFRQDLFYRINVIELCVPPLRERREDIAPMAR
RILTQLAQRAGVEVPHIDPACMERLSNYRFPGNVRELENILERAFTLCEGDTIMASDIQLNASPLPGEDSALRQIDSLED
FLDDIERKALTQALEETRWNKTAAARRLGLTFRSMRYRLKKLGLED
MNNPLALIIDDEPDILELLDMTLGRMNISTRSATSLGQALELLNQQHFDLCLTDMRLPDGDGLSVVRHIQQHCPNTPVAM
ITAYGSLDTAITALKSGAFDFVTKPVDLQRLRELVNGALRLNQRQEAPLIEESDDPIQGSSPPIQQLRRQIAKLARSEAP
LYISGESGSGKELVARRIHALGPRACHPFVPVNCGAIPSELMESEFFGHRKGSFTGAVADKPGLFQAASGGTLFLDEVAD
LPLAMQVKLLRAIQEKAVRPVGTQQEQPVNVRLLCATHKDLAVEVAEGRFRQDLFYRINVIELCVPPLRERREDIAPMAR
RILTQLAQRAGVEVPHIDPACMERLSNYRFPGNVRELENILERAFTLCEGDTIMASDIQLNASPLPGEDSALRQIDSLED
FLDDIERKALTQALEETRWNKTAAARRLGLTFRSMRYRLKKLGLED
Nucleotide
Download Length: 1341 bp
>NTDB_id=821128 QAO71_RS04595 WP_235818283.1 953948..955288(-) (pilR) [Halopseudomonas sp. SMJS2]
GTGAACAATCCGCTGGCACTGATCATCGATGACGAGCCCGATATCCTGGAGCTGCTCGACATGACTCTGGGGCGGATGAA
CATCAGTACCCGCAGCGCGACCAGCCTCGGCCAGGCGCTGGAGCTGCTCAATCAGCAGCACTTCGACTTGTGCCTGACCG
ACATGCGCCTGCCTGATGGCGATGGCTTGAGTGTGGTGCGACATATTCAGCAACATTGCCCAAACACCCCGGTGGCGATG
ATTACCGCCTATGGCAGCCTGGATACCGCCATCACTGCGCTCAAATCCGGCGCCTTCGATTTCGTTACCAAGCCCGTCGA
CTTGCAGCGGCTGCGCGAACTGGTCAACGGTGCCCTACGGCTGAACCAGCGCCAGGAAGCCCCACTGATTGAAGAGAGCG
ACGATCCGATTCAGGGCAGCTCACCGCCAATCCAGCAATTGCGTCGACAGATCGCCAAGCTCGCCCGCAGCGAGGCACCG
CTCTATATCAGTGGTGAATCCGGCAGCGGCAAGGAACTGGTCGCCCGGCGCATCCACGCGCTGGGGCCTCGGGCCTGTCA
TCCCTTCGTGCCGGTGAACTGCGGGGCGATACCTTCGGAGCTGATGGAAAGCGAATTCTTCGGCCACCGCAAAGGCAGCT
TCACCGGCGCCGTGGCTGACAAGCCCGGCCTGTTCCAGGCGGCCAGTGGCGGCACCCTGTTTCTCGATGAGGTGGCCGAT
CTGCCGTTGGCGATGCAGGTCAAGCTGCTGCGGGCGATTCAGGAAAAGGCGGTGCGTCCGGTCGGCACCCAGCAGGAGCA
GCCAGTGAACGTGCGGCTGCTATGCGCGACCCACAAGGACCTGGCGGTGGAAGTGGCCGAAGGGCGATTTCGCCAGGACC
TGTTCTATCGGATCAATGTGATCGAGCTCTGCGTACCACCGCTGCGCGAGCGCCGTGAGGATATCGCACCGATGGCCCGG
CGCATTCTTACCCAACTGGCCCAGCGCGCGGGCGTCGAGGTGCCCCATATAGACCCGGCGTGCATGGAGCGGTTGAGCAA
CTACCGCTTCCCCGGCAACGTGCGCGAGCTGGAGAATATTCTGGAGCGGGCCTTCACCCTGTGTGAAGGCGATACCATCA
TGGCCAGCGATATCCAGCTTAACGCCAGCCCGCTTCCCGGCGAGGACTCCGCGCTGCGCCAGATCGATTCGCTGGAAGAC
TTTCTCGATGATATCGAACGCAAGGCATTGACCCAGGCGCTGGAGGAAACCCGCTGGAACAAGACCGCAGCCGCCCGCCG
CCTGGGCCTGACGTTTCGGTCAATGCGCTATCGATTGAAGAAACTGGGACTGGAAGACTAG
GTGAACAATCCGCTGGCACTGATCATCGATGACGAGCCCGATATCCTGGAGCTGCTCGACATGACTCTGGGGCGGATGAA
CATCAGTACCCGCAGCGCGACCAGCCTCGGCCAGGCGCTGGAGCTGCTCAATCAGCAGCACTTCGACTTGTGCCTGACCG
ACATGCGCCTGCCTGATGGCGATGGCTTGAGTGTGGTGCGACATATTCAGCAACATTGCCCAAACACCCCGGTGGCGATG
ATTACCGCCTATGGCAGCCTGGATACCGCCATCACTGCGCTCAAATCCGGCGCCTTCGATTTCGTTACCAAGCCCGTCGA
CTTGCAGCGGCTGCGCGAACTGGTCAACGGTGCCCTACGGCTGAACCAGCGCCAGGAAGCCCCACTGATTGAAGAGAGCG
ACGATCCGATTCAGGGCAGCTCACCGCCAATCCAGCAATTGCGTCGACAGATCGCCAAGCTCGCCCGCAGCGAGGCACCG
CTCTATATCAGTGGTGAATCCGGCAGCGGCAAGGAACTGGTCGCCCGGCGCATCCACGCGCTGGGGCCTCGGGCCTGTCA
TCCCTTCGTGCCGGTGAACTGCGGGGCGATACCTTCGGAGCTGATGGAAAGCGAATTCTTCGGCCACCGCAAAGGCAGCT
TCACCGGCGCCGTGGCTGACAAGCCCGGCCTGTTCCAGGCGGCCAGTGGCGGCACCCTGTTTCTCGATGAGGTGGCCGAT
CTGCCGTTGGCGATGCAGGTCAAGCTGCTGCGGGCGATTCAGGAAAAGGCGGTGCGTCCGGTCGGCACCCAGCAGGAGCA
GCCAGTGAACGTGCGGCTGCTATGCGCGACCCACAAGGACCTGGCGGTGGAAGTGGCCGAAGGGCGATTTCGCCAGGACC
TGTTCTATCGGATCAATGTGATCGAGCTCTGCGTACCACCGCTGCGCGAGCGCCGTGAGGATATCGCACCGATGGCCCGG
CGCATTCTTACCCAACTGGCCCAGCGCGCGGGCGTCGAGGTGCCCCATATAGACCCGGCGTGCATGGAGCGGTTGAGCAA
CTACCGCTTCCCCGGCAACGTGCGCGAGCTGGAGAATATTCTGGAGCGGGCCTTCACCCTGTGTGAAGGCGATACCATCA
TGGCCAGCGATATCCAGCTTAACGCCAGCCCGCTTCCCGGCGAGGACTCCGCGCTGCGCCAGATCGATTCGCTGGAAGAC
TTTCTCGATGATATCGAACGCAAGGCATTGACCCAGGCGCTGGAGGAAACCCGCTGGAACAAGACCGCAGCCGCCCGCCG
CCTGGGCCTGACGTTTCGGTCAATGCGCTATCGATTGAAGAAACTGGGACTGGAAGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
69.933 |
100 |
0.704 |
| pilR | Acinetobacter baumannii strain A118 |
49.784 |
100 |
0.518 |
| luxO | Vibrio cholerae strain A1552 |
37.472 |
100 |
0.379 |