Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | R8566_RS00115 | Genome accession | NZ_AP026920 |
| Coordinates | 21577..21813 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939547.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700014 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 16577..26813
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8566_RS00105 | - | 20283..20492 (+) | 210 | Protein_14 | transposase | - |
| R8566_RS00110 | - | 20527..21311 (-) | 785 | Protein_15 | transposase | - |
| R8566_RS00115 (PC0014_00160) | comW | 21577..21813 (+) | 237 | WP_000939547.1 | sigma(X)-activator ComW | Regulator |
| R8566_RS00120 (PC0014_00170) | - | 22044..23330 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| R8566_RS00125 (PC0014_00180) | tadA | 23531..23998 (+) | 468 | WP_000291877.1 | tRNA adenosine(34) deaminase TadA | - |
| R8566_RS00135 (PC0014_00190) | - | 24207..25343 (-) | 1137 | WP_224757251.1 | site-specific integrase | - |
| R8566_RS00140 (PC0014_00200) | - | 25468..25818 (-) | 351 | WP_001020945.1 | hypothetical protein | - |
| R8566_RS00145 (PC0014_00210) | - | 25832..26212 (-) | 381 | WP_000136430.1 | ImmA/IrrE family metallo-endopeptidase | - |
| R8566_RS00150 (PC0014_00220) | - | 26234..26590 (-) | 357 | WP_000153672.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9688.15 Da Isoelectric Point: 6.7051
>NTDB_id=82028 R8566_RS00115 WP_000939547.1 21577..21813(+) (comW) [Streptococcus pneumoniae strain PZ900700014]
MLQKIYEQMTNFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMTNFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=82028 R8566_RS00115 WP_000939547.1 21577..21813(+) (comW) [Streptococcus pneumoniae strain PZ900700014]
ATGTTACAAAAAATTTATGAGCAGATGACTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGACTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
98.718 |
100 |
0.987 |
| comW | Streptococcus pneumoniae D39 |
98.718 |
100 |
0.987 |
| comW | Streptococcus pneumoniae R6 |
98.718 |
100 |
0.987 |
| comW | Streptococcus pneumoniae TIGR4 |
98.718 |
100 |
0.987 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |