Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAY75_RS13620 | Genome accession | NZ_CP123168 |
| Coordinates | 2746901..2747371 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain BE-MSSA4 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2723564..2752316 | 2746901..2747371 | within | 0 |
Gene organization within MGE regions
Location: 2723564..2752316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAY75_RS13475 (QAY75_13500) | - | 2723564..2724190 (-) | 627 | WP_000522381.1 | nitroreductase family protein | - |
| QAY75_RS13480 (QAY75_13505) | - | 2724387..2725646 (+) | 1260 | WP_000120297.1 | SdrH family protein | - |
| QAY75_RS13485 (QAY75_13510) | mroQ | 2725671..2726414 (-) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| QAY75_RS13490 (QAY75_13515) | groES | 2726589..2726873 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| QAY75_RS13495 (QAY75_13520) | groL | 2726949..2728565 (+) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| QAY75_RS13500 (QAY75_13525) | - | 2729105..2730412 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| QAY75_RS13505 (QAY75_13530) | - | 2730856..2732079 (-) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| QAY75_RS13510 (QAY75_13535) | lukH | 2732515..2733570 (+) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| QAY75_RS13515 (QAY75_13540) | lukG | 2733592..2734608 (+) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| QAY75_RS13520 (QAY75_13545) | sph | 2734846..2735670 (-) | 825 | Protein_2622 | sphingomyelin phosphodiesterase | - |
| QAY75_RS13525 (QAY75_13550) | - | 2735727..2736764 (-) | 1038 | WP_001814397.1 | tyrosine-type recombinase/integrase | - |
| QAY75_RS13530 (QAY75_13555) | - | 2736957..2737661 (-) | 705 | WP_000440838.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAY75_RS13535 (QAY75_13560) | - | 2737801..2737968 (-) | 168 | WP_000705238.1 | hypothetical protein | - |
| QAY75_RS13540 (QAY75_13565) | - | 2738124..2738822 (-) | 699 | WP_000837517.1 | potassium channel family protein | - |
| QAY75_RS13545 (QAY75_13570) | - | 2739004..2739636 (-) | 633 | WP_031763806.1 | LexA family transcriptional regulator | - |
| QAY75_RS13550 (QAY75_13575) | - | 2739790..2740017 (+) | 228 | WP_000192116.1 | helix-turn-helix transcriptional regulator | - |
| QAY75_RS13555 (QAY75_13580) | - | 2740040..2740828 (+) | 789 | WP_031763800.1 | phage antirepressor | - |
| QAY75_RS13560 (QAY75_13585) | - | 2740845..2741039 (+) | 195 | WP_001566738.1 | hypothetical protein | - |
| QAY75_RS13565 (QAY75_13590) | - | 2741034..2741390 (-) | 357 | WP_000768245.1 | DUF2513 domain-containing protein | - |
| QAY75_RS13570 (QAY75_13595) | - | 2741440..2741631 (+) | 192 | WP_000389905.1 | hypothetical protein | - |
| QAY75_RS13575 (QAY75_13600) | - | 2741633..2741860 (-) | 228 | WP_000801108.1 | hypothetical protein | - |
| QAY75_RS13580 (QAY75_13605) | - | 2741919..2742239 (+) | 321 | WP_001120935.1 | DUF771 domain-containing protein | - |
| QAY75_RS13585 (QAY75_13610) | - | 2742236..2742397 (+) | 162 | WP_000066014.1 | DUF1270 domain-containing protein | - |
| QAY75_RS13590 (QAY75_13615) | - | 2742490..2742792 (+) | 303 | WP_031807559.1 | DUF2482 family protein | - |
| QAY75_RS13595 (QAY75_13620) | - | 2742796..2743056 (+) | 261 | WP_031807558.1 | DUF1108 family protein | - |
| QAY75_RS13600 (QAY75_13625) | - | 2743065..2743328 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| QAY75_RS13605 (QAY75_13630) | - | 2743337..2745280 (+) | 1944 | WP_031928235.1 | AAA family ATPase | - |
| QAY75_RS13610 (QAY75_13635) | - | 2745282..2746202 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| QAY75_RS13615 (QAY75_13640) | - | 2746283..2746900 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| QAY75_RS13620 (QAY75_13645) | ssbA | 2746901..2747371 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| QAY75_RS13625 (QAY75_13650) | - | 2747401..2748285 (+) | 885 | WP_000148300.1 | DnaD domain protein | - |
| QAY75_RS13630 (QAY75_13655) | - | 2748292..2748510 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| QAY75_RS13635 (QAY75_13660) | - | 2748519..2748923 (+) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAY75_RS13640 (QAY75_13665) | - | 2748936..2749307 (+) | 372 | WP_031928234.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAY75_RS13645 (QAY75_13670) | - | 2749308..2749556 (+) | 249 | WP_031928233.1 | phi PVL orf 51-like protein | - |
| QAY75_RS13650 (QAY75_13675) | - | 2749597..2749845 (+) | 249 | WP_031889594.1 | DUF1024 family protein | - |
| QAY75_RS13655 (QAY75_13680) | - | 2749838..2750347 (+) | 510 | WP_000185636.1 | dUTP diphosphatase | - |
| QAY75_RS13660 (QAY75_13685) | - | 2750384..2750629 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| QAY75_RS13665 (QAY75_13690) | - | 2750626..2750814 (+) | 189 | WP_000195782.1 | DUF1381 domain-containing protein | - |
| QAY75_RS13670 (QAY75_13695) | - | 2750789..2750989 (+) | 201 | WP_001125015.1 | hypothetical protein | - |
| QAY75_RS13675 (QAY75_13700) | rinB | 2750992..2751141 (+) | 150 | WP_000237868.1 | transcriptional activator RinB | - |
| QAY75_RS13680 (QAY75_13705) | - | 2751141..2751341 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| QAY75_RS13685 (QAY75_13710) | - | 2751369..2751785 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| QAY75_RS13690 (QAY75_13715) | - | 2752017..2752316 (+) | 300 | WP_000988330.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=819932 QAY75_RS13620 WP_000934759.1 2746901..2747371(+) (ssbA) [Staphylococcus aureus strain BE-MSSA4]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=819932 QAY75_RS13620 WP_000934759.1 2746901..2747371(+) (ssbA) [Staphylococcus aureus strain BE-MSSA4]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |