Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO40_RS06055 | Genome accession | NZ_CP123166 |
| Coordinates | 1230253..1230723 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain BE-MSSA5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1225253..1235723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO40_RS06015 (QAO40_06050) | - | 1225271..1225591 (+) | 321 | WP_001120935.1 | DUF771 domain-containing protein | - |
| QAO40_RS06020 (QAO40_06055) | - | 1225588..1225749 (+) | 162 | WP_000066014.1 | DUF1270 domain-containing protein | - |
| QAO40_RS06025 (QAO40_06060) | - | 1225842..1226144 (+) | 303 | WP_031807559.1 | DUF2482 family protein | - |
| QAO40_RS06030 (QAO40_06065) | - | 1226148..1226408 (+) | 261 | WP_031807558.1 | DUF1108 family protein | - |
| QAO40_RS06035 (QAO40_06070) | - | 1226417..1226680 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| QAO40_RS06040 (QAO40_06075) | - | 1226689..1228632 (+) | 1944 | WP_411896451.1 | AAA family ATPase | - |
| QAO40_RS06045 (QAO40_06080) | - | 1228634..1229554 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| QAO40_RS06050 (QAO40_06085) | - | 1229635..1230252 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| QAO40_RS06055 (QAO40_06090) | ssbA | 1230253..1230723 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO40_RS06060 (QAO40_06095) | - | 1230753..1231637 (+) | 885 | WP_000148300.1 | DnaD domain protein | - |
| QAO40_RS06065 (QAO40_06100) | - | 1231644..1231862 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| QAO40_RS06070 (QAO40_06105) | - | 1231871..1232275 (+) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAO40_RS06075 (QAO40_06110) | - | 1232288..1232659 (+) | 372 | WP_031928234.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAO40_RS06080 (QAO40_06115) | - | 1232728..1232973 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| QAO40_RS06085 (QAO40_06120) | - | 1232970..1233158 (+) | 189 | WP_000195782.1 | DUF1381 domain-containing protein | - |
| QAO40_RS06090 (QAO40_06125) | - | 1233133..1233333 (+) | 201 | WP_001125015.1 | hypothetical protein | - |
| QAO40_RS06095 (QAO40_06130) | rinB | 1233336..1233485 (+) | 150 | WP_000237868.1 | transcriptional activator RinB | - |
| QAO40_RS06100 (QAO40_06135) | - | 1233485..1233685 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| QAO40_RS06105 (QAO40_06140) | - | 1233713..1234129 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| QAO40_RS06110 (QAO40_06145) | - | 1234361..1234660 (+) | 300 | WP_000988330.1 | HNH endonuclease | - |
| QAO40_RS06115 (QAO40_06150) | - | 1234790..1235134 (+) | 345 | WP_000402904.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=819860 QAO40_RS06055 WP_000934759.1 1230253..1230723(+) (ssbA) [Staphylococcus aureus strain BE-MSSA5]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=819860 QAO40_RS06055 WP_000934759.1 1230253..1230723(+) (ssbA) [Staphylococcus aureus strain BE-MSSA5]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |