Detailed information NTG0819735

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: R4706_RS04070
• Genome accession: NZ_CP137111
• Coordinates: 834484..835482 (-)
• Length: 332 a.a.
• NCBI ID: WP_025171978.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 17023
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 829484..840482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4706_RS04050	eeP	830849..832108 (-)	1260	WP_000900660.1	RIP metalloprotease RseP	Regulator
R4706_RS04055	-	832130..832933 (-)	804	WP_000189866.1	phosphatidate cytidylyltransferase	-
R4706_RS04060	-	832942..833700 (-)	759	WP_000466719.1	isoprenyl transferase	-
R4706_RS04065	-	833931..834503 (-)	573	WP_044727752.1	nucleotidyltransferase family protein	-
R4706_RS04070	ruvB	834484..835482 (-)	999	WP_025171978.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
R4706_RS04075	-	835615..835707 (+)	93	WP_000970377.1	type I toxin-antitoxin system Fst family toxin	-
R4706_RS04080	-	836048..836140 (+)	93	WP_000970294.1	type I toxin-antitoxin system Fst family toxin	-
R4706_RS04085	-	836992..837408 (-)	417	WP_000628382.1	GNAT family N-acetyltransferase	-
R4706_RS04090	-	837420..838115 (-)	696	WP_001144917.1	GNAT family N-acetyltransferase	-
R4706_RS04095	-	838342..839403 (-)	1062	WP_001260285.1	GTP pyrophosphokinase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37319.76 Da
• Isoelectric Point: 4.5018

>NTDB_id=819735 R4706_RS04070 WP_025171978.1 834484..835482(-) (ruvB) [Streptococcus pneumoniae strain 17023]
MSRILDNEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGDGVIN
DVITDKALTMLDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRMATAK
AYEHLGYEYNEK

Nucleotide

• Length: 999 bp

>NTDB_id=819735 R4706_RS04070 WP_025171978.1 834484..835482(-) (ruvB) [Streptococcus pneumoniae strain 17023]
ATGAGTAGAATTTTAGATAATGAGATAATGGGGGACGAGGAGTTAGTAGAACGCACGCTCCGTCCTCAGTACTTACGTGA
ATATATTGGGCAGGATAAGGTTAAGGACCAGCTTCAAATCTTTATAGAAGCTGCCAAAATGCGAGATGAAGCGCTGGATC
ATGTCCTCTTATTTGGGCCTCCAGGTTTGGGGAAAACGACCATGGCTTTTGTTATTGCCAACGAACTAGGTGTCAATCTC
AAGCAGACTTCGGGTCCAGTCATTGAAAAAGCCGGAGATCTGGTAGCAATTTTGAATGACTTAGAGCCTGGGGATGTCCT
CTTTATTGATGAGATTCATCGCTTGCCTATGTCGGTGGAAGAGGTGCTTTATAGTGCCATGGAGGACTTTTACATAGATA
TTATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTTCATTTGGAGTTACCACCTTTTACCTTGATTGGTGCGACGACTCGG
GCTGGTATGCTCTCAAATCCACTACGGGCACGTTTTGGGATTACAGGTCATATGGAGTATTATGCTCATGCTGACTTGAC
GGAAATTGTCGAGCGGACGGCAGATATTTTTGAGATGGAAATCACTCATGAAGCAGCGTCTGAGTTGGCCCTACGTAGCC
GTGGAACCCCTCGTATTGCCAATCGTCTCCTCAAGCGCGTGCGCGATTTTGCCCAGATTATGGGGGATGGGGTTATCAAT
GATGTTATTACGGATAAGGCTTTGACCATGCTGGATGTTGACCATGAAGGTCTGGACTATGTGGACCAAAAAATCCTTCG
GACCATGATTGAGATGTACAGTGGAGGGCCTGTTGGTTTAGGAACTCTTTCTGTGAATATTGCCGAGGAGCGCGAGACGG
TGGAGGACATGTATGAACCTTACTTAATCCAAAAAGGTTTTATCATGCGGACACGGTCTGGACGGATGGCGACTGCTAAG
GCATATGAGCATTTGGGGTATGAGTACAATGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	98.494	100	0.985
ruvB	Streptococcus pneumoniae R6	98.193	100	0.982
ruvB	Streptococcus pneumoniae D39	98.193	100	0.982
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.736	98.193	0.596
ruvB	Helicobacter pylori 26695	50.464	97.289	0.491
ruvB	Synechocystis sp. PCC 6803	47.892	100	0.479