Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO43_RS07990 | Genome accession | NZ_CP123082 |
| Coordinates | 1566315..1566818 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain SW-MRSA58 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1544525..1570878 | 1566315..1566818 | within | 0 |
Gene organization within MGE regions
Location: 1544525..1570878
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO43_RS07830 (QAO43_07860) | - | 1544525..1544776 (-) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| QAO43_RS07835 (QAO43_07865) | - | 1545076..1545339 (+) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QAO43_RS07840 (QAO43_07870) | - | 1545476..1546048 (-) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| QAO43_RS07845 (QAO43_07875) | - | 1546229..1546597 (-) | 369 | WP_000849163.1 | YxeA family protein | - |
| QAO43_RS07850 (QAO43_07880) | selX | 1546966..1547577 (-) | 612 | WP_000475325.1 | staphylococcal enterotoxin-like toxin X | - |
| QAO43_RS07855 (QAO43_07885) | - | 1547783..1548496 (+) | 714 | Protein_1504 | tyrosine-type recombinase/integrase | - |
| QAO43_RS07860 (QAO43_07890) | - | 1548535..1549473 (+) | 939 | WP_001817700.1 | Abi family protein | - |
| QAO43_RS07865 (QAO43_07895) | - | 1550317..1551489 (-) | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| QAO43_RS07870 (QAO43_07900) | - | 1551608..1551787 (-) | 180 | WP_000797954.1 | hypothetical protein | - |
| QAO43_RS07875 (QAO43_07905) | - | 1551803..1552315 (-) | 513 | WP_000813311.1 | hypothetical protein | - |
| QAO43_RS07880 (QAO43_07910) | - | 1552433..1552834 (-) | 402 | WP_000683457.1 | hypothetical protein | - |
| QAO43_RS07885 (QAO43_07915) | - | 1553012..1553980 (-) | 969 | WP_000801980.1 | Abi family protein | - |
| QAO43_RS07890 (QAO43_07925) | - | 1554257..1554826 (-) | 570 | WP_001293071.1 | terminase small subunit | - |
| QAO43_RS07895 (QAO43_07930) | - | 1554823..1555035 (-) | 213 | WP_001656917.1 | hypothetical protein | - |
| QAO43_RS07900 (QAO43_07935) | - | 1555167..1555694 (-) | 528 | WP_031870369.1 | spore coat protein | - |
| QAO43_RS07905 (QAO43_07940) | - | 1555747..1556400 (-) | 654 | WP_000214170.1 | hypothetical protein | - |
| QAO43_RS07910 (QAO43_07945) | - | 1556431..1556775 (-) | 345 | WP_001288442.1 | hypothetical protein | - |
| QAO43_RS07915 (QAO43_07950) | - | 1557483..1558124 (-) | 642 | WP_031870361.1 | pathogenicity island protein | - |
| QAO43_RS07920 (QAO43_07955) | - | 1558126..1558398 (-) | 273 | WP_223297761.1 | hypothetical protein | - |
| QAO43_RS07925 (QAO43_07960) | - | 1558391..1558747 (-) | 357 | WP_001059599.1 | hypothetical protein | - |
| QAO43_RS07930 (QAO43_07965) | - | 1558990..1560360 (-) | 1371 | WP_000151864.1 | phage/plasmid primase, P4 family | - |
| QAO43_RS07935 (QAO43_07970) | - | 1560372..1561241 (-) | 870 | WP_031870360.1 | primase alpha helix C-terminal domain-containing protein | - |
| QAO43_RS07940 (QAO43_07975) | tscT | 1561306..1561632 (-) | 327 | WP_001103967.1 | type II toxin-antitoxin system toxin TscT | - |
| QAO43_RS07945 (QAO43_07980) | - | 1561633..1562016 (-) | 384 | WP_000403837.1 | hypothetical protein | - |
| QAO43_RS07950 (QAO43_07985) | - | 1562018..1562221 (-) | 204 | WP_001231376.1 | hypothetical protein | - |
| QAO43_RS07955 (QAO43_07990) | - | 1562188..1562361 (-) | 174 | WP_000784892.1 | hypothetical protein | - |
| QAO43_RS07960 (QAO43_07995) | - | 1562373..1562645 (-) | 273 | WP_031870322.1 | helix-turn-helix domain-containing protein | - |
| QAO43_RS07965 (QAO43_08000) | - | 1562646..1562810 (-) | 165 | WP_001611932.1 | helix-turn-helix domain-containing protein | - |
| QAO43_RS07970 (QAO43_08005) | - | 1562959..1563582 (+) | 624 | WP_000230361.1 | helix-turn-helix domain-containing protein | - |
| QAO43_RS07975 (QAO43_08010) | - | 1563743..1564957 (+) | 1215 | WP_000270135.1 | tyrosine-type recombinase/integrase | - |
| QAO43_RS07980 (QAO43_08015) | - | 1565070..1565789 (+) | 720 | WP_000400841.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAO43_RS07985 (QAO43_08020) | rpsR | 1566021..1566263 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QAO43_RS07990 (QAO43_08025) | ssbA | 1566315..1566818 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO43_RS07995 (QAO43_08030) | rpsF | 1566839..1567135 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QAO43_RS08000 (QAO43_08035) | - | 1567379..1567570 (+) | 192 | WP_001052484.1 | hypothetical protein | - |
| QAO43_RS08005 (QAO43_08040) | ychF | 1567656..1568753 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| QAO43_RS08010 (QAO43_08045) | - | 1568765..1568968 (-) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| QAO43_RS08015 (QAO43_08050) | - | 1568998..1569879 (-) | 882 | WP_000373073.1 | mechanosensitive ion channel family protein | - |
| QAO43_RS08020 (QAO43_08055) | - | 1570033..1570878 (-) | 846 | WP_001557587.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=818353 QAO43_RS07990 WP_000934799.1 1566315..1566818(-) (ssbA) [Staphylococcus aureus strain SW-MRSA58]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=818353 QAO43_RS07990 WP_000934799.1 1566315..1566818(-) (ssbA) [Staphylococcus aureus strain SW-MRSA58]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |