Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAY63_RS11475 | Genome accession | NZ_CP123080 |
| Coordinates | 2300048..2300551 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain SW-MRSA59 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2295988..2322341 | 2300048..2300551 | within | 0 |
Gene organization within MGE regions
Location: 2295988..2322341
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAY63_RS11445 (QAY63_11450) | - | 2295988..2296833 (+) | 846 | WP_001557587.1 | ParB/RepB/Spo0J family partition protein | - |
| QAY63_RS11450 (QAY63_11455) | - | 2296987..2297868 (+) | 882 | WP_000373073.1 | mechanosensitive ion channel family protein | - |
| QAY63_RS11455 (QAY63_11460) | - | 2297898..2298101 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| QAY63_RS11460 (QAY63_11465) | ychF | 2298113..2299210 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| QAY63_RS11465 (QAY63_11470) | - | 2299296..2299487 (-) | 192 | WP_001052484.1 | hypothetical protein | - |
| QAY63_RS11470 (QAY63_11475) | rpsF | 2299731..2300027 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QAY63_RS11475 (QAY63_11480) | ssbA | 2300048..2300551 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QAY63_RS11480 (QAY63_11485) | rpsR | 2300603..2300845 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QAY63_RS11485 (QAY63_11490) | - | 2301077..2301796 (-) | 720 | WP_000400841.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAY63_RS11490 (QAY63_11495) | - | 2301909..2303123 (-) | 1215 | WP_000270135.1 | tyrosine-type recombinase/integrase | - |
| QAY63_RS11495 (QAY63_11500) | - | 2303284..2303907 (-) | 624 | WP_000230361.1 | helix-turn-helix domain-containing protein | - |
| QAY63_RS11500 (QAY63_11505) | - | 2304056..2304220 (+) | 165 | WP_001611932.1 | helix-turn-helix domain-containing protein | - |
| QAY63_RS11505 (QAY63_11510) | - | 2304221..2304493 (+) | 273 | WP_031870322.1 | helix-turn-helix domain-containing protein | - |
| QAY63_RS11510 (QAY63_11515) | - | 2304505..2304678 (+) | 174 | WP_000784892.1 | hypothetical protein | - |
| QAY63_RS11515 (QAY63_11520) | - | 2304645..2304848 (+) | 204 | WP_001231376.1 | hypothetical protein | - |
| QAY63_RS11520 (QAY63_11525) | - | 2304850..2305233 (+) | 384 | WP_000403837.1 | hypothetical protein | - |
| QAY63_RS11525 (QAY63_11530) | tscT | 2305234..2305560 (+) | 327 | WP_001103967.1 | type II toxin-antitoxin system toxin TscT | - |
| QAY63_RS11530 (QAY63_11535) | - | 2305625..2306494 (+) | 870 | WP_031870360.1 | primase alpha helix C-terminal domain-containing protein | - |
| QAY63_RS11535 (QAY63_11540) | - | 2306506..2307876 (+) | 1371 | WP_000151864.1 | phage/plasmid primase, P4 family | - |
| QAY63_RS11540 (QAY63_11545) | - | 2308119..2308475 (+) | 357 | WP_001059599.1 | hypothetical protein | - |
| QAY63_RS11545 (QAY63_11550) | - | 2308477..2308740 (+) | 264 | WP_001003076.1 | hypothetical protein | - |
| QAY63_RS11550 (QAY63_11555) | - | 2308742..2309383 (+) | 642 | WP_031870361.1 | pathogenicity island protein | - |
| QAY63_RS11555 (QAY63_11560) | - | 2310091..2310435 (+) | 345 | WP_001288442.1 | hypothetical protein | - |
| QAY63_RS11560 (QAY63_11565) | - | 2310466..2311119 (+) | 654 | WP_000214170.1 | hypothetical protein | - |
| QAY63_RS11565 (QAY63_11570) | - | 2311172..2311699 (+) | 528 | WP_031870369.1 | spore coat protein | - |
| QAY63_RS11570 (QAY63_11575) | - | 2311831..2312043 (+) | 213 | WP_001656917.1 | hypothetical protein | - |
| QAY63_RS11575 (QAY63_11580) | - | 2312040..2312609 (+) | 570 | WP_001293071.1 | terminase small subunit | - |
| QAY63_RS11580 (QAY63_11590) | - | 2312886..2313854 (+) | 969 | WP_000801980.1 | Abi family protein | - |
| QAY63_RS11585 (QAY63_11595) | - | 2314032..2314433 (+) | 402 | WP_000683457.1 | hypothetical protein | - |
| QAY63_RS11590 (QAY63_11600) | - | 2314551..2315063 (+) | 513 | WP_000813311.1 | hypothetical protein | - |
| QAY63_RS11595 (QAY63_11605) | - | 2315079..2315258 (+) | 180 | WP_000797954.1 | hypothetical protein | - |
| QAY63_RS11600 (QAY63_11610) | - | 2315377..2316549 (+) | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| QAY63_RS11605 (QAY63_11615) | - | 2317393..2318331 (-) | 939 | WP_001817700.1 | Abi family protein | - |
| QAY63_RS11610 (QAY63_11620) | - | 2318370..2319083 (-) | 714 | Protein_2266 | tyrosine-type recombinase/integrase | - |
| QAY63_RS11615 (QAY63_11625) | selX | 2319289..2319900 (+) | 612 | WP_000475325.1 | staphylococcal enterotoxin-like toxin X | - |
| QAY63_RS11620 (QAY63_11630) | - | 2320269..2320637 (+) | 369 | WP_000849163.1 | YxeA family protein | - |
| QAY63_RS11625 (QAY63_11635) | - | 2320818..2321390 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| QAY63_RS11630 (QAY63_11640) | - | 2321527..2321790 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QAY63_RS11635 (QAY63_11645) | - | 2322090..2322341 (+) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=818316 QAY63_RS11475 WP_000934799.1 2300048..2300551(+) (ssbA) [Staphylococcus aureus strain SW-MRSA59]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=818316 QAY63_RS11475 WP_000934799.1 2300048..2300551(+) (ssbA) [Staphylococcus aureus strain SW-MRSA59]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |