Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO35_RS02175 | Genome accession | NZ_CP123074 |
| Coordinates | 494419..494922 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain SW-MRSA61 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 490359..516712 | 494419..494922 | within | 0 |
Gene organization within MGE regions
Location: 490359..516712
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO35_RS02145 (QAO35_02140) | - | 490359..491204 (+) | 846 | WP_001557587.1 | ParB/RepB/Spo0J family partition protein | - |
| QAO35_RS02150 (QAO35_02145) | - | 491358..492239 (+) | 882 | WP_000373073.1 | mechanosensitive ion channel family protein | - |
| QAO35_RS02155 (QAO35_02150) | - | 492269..492472 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| QAO35_RS02160 (QAO35_02155) | ychF | 492484..493581 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| QAO35_RS02165 (QAO35_02160) | - | 493667..493858 (-) | 192 | WP_001052484.1 | hypothetical protein | - |
| QAO35_RS02170 (QAO35_02165) | rpsF | 494102..494398 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QAO35_RS02175 (QAO35_02170) | ssbA | 494419..494922 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO35_RS02180 (QAO35_02175) | rpsR | 494974..495216 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QAO35_RS02185 (QAO35_02180) | - | 495448..496167 (-) | 720 | WP_000400841.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAO35_RS02190 (QAO35_02185) | - | 496280..497494 (-) | 1215 | WP_000270135.1 | tyrosine-type recombinase/integrase | - |
| QAO35_RS02195 (QAO35_02190) | - | 497655..498278 (-) | 624 | WP_000230361.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS02200 (QAO35_02195) | - | 498427..498591 (+) | 165 | WP_001611932.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS02205 (QAO35_02200) | - | 498592..498864 (+) | 273 | WP_031870322.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS02210 (QAO35_02205) | - | 498876..499049 (+) | 174 | WP_000784892.1 | hypothetical protein | - |
| QAO35_RS02215 (QAO35_02210) | - | 499016..499219 (+) | 204 | WP_001231376.1 | hypothetical protein | - |
| QAO35_RS02220 (QAO35_02215) | - | 499221..499604 (+) | 384 | WP_000403837.1 | hypothetical protein | - |
| QAO35_RS02225 (QAO35_02220) | tscT | 499605..499931 (+) | 327 | WP_001103967.1 | type II toxin-antitoxin system toxin TscT | - |
| QAO35_RS02230 (QAO35_02225) | - | 499996..500865 (+) | 870 | WP_031870360.1 | primase alpha helix C-terminal domain-containing protein | - |
| QAO35_RS02235 (QAO35_02230) | - | 500877..502247 (+) | 1371 | WP_000151864.1 | phage/plasmid primase, P4 family | - |
| QAO35_RS02240 (QAO35_02235) | - | 502490..502846 (+) | 357 | WP_001059599.1 | hypothetical protein | - |
| QAO35_RS02245 (QAO35_02240) | - | 502839..503111 (+) | 273 | WP_223297761.1 | hypothetical protein | - |
| QAO35_RS02250 (QAO35_02245) | - | 503113..503754 (+) | 642 | WP_031870361.1 | pathogenicity island protein | - |
| QAO35_RS02255 (QAO35_02250) | - | 504462..504806 (+) | 345 | WP_001288442.1 | hypothetical protein | - |
| QAO35_RS02260 (QAO35_02255) | - | 504837..505490 (+) | 654 | WP_000214170.1 | hypothetical protein | - |
| QAO35_RS02265 (QAO35_02260) | - | 505543..506070 (+) | 528 | WP_031870369.1 | spore coat protein | - |
| QAO35_RS02270 (QAO35_02265) | - | 506202..506414 (+) | 213 | WP_001656917.1 | hypothetical protein | - |
| QAO35_RS02275 (QAO35_02270) | - | 506411..506980 (+) | 570 | WP_001293071.1 | terminase small subunit | - |
| QAO35_RS02280 (QAO35_02280) | - | 507257..508225 (+) | 969 | WP_000801980.1 | Abi family protein | - |
| QAO35_RS02285 (QAO35_02285) | - | 508403..508804 (+) | 402 | WP_000683457.1 | hypothetical protein | - |
| QAO35_RS02290 (QAO35_02290) | - | 508922..509434 (+) | 513 | WP_000813311.1 | hypothetical protein | - |
| QAO35_RS02295 (QAO35_02295) | - | 509450..509629 (+) | 180 | WP_000797954.1 | hypothetical protein | - |
| QAO35_RS02300 (QAO35_02300) | - | 509748..510920 (+) | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| QAO35_RS02305 (QAO35_02305) | - | 511764..512702 (-) | 939 | WP_001817700.1 | Abi family protein | - |
| QAO35_RS02310 (QAO35_02310) | - | 512741..513454 (-) | 714 | Protein_459 | tyrosine-type recombinase/integrase | - |
| QAO35_RS02315 (QAO35_02315) | selX | 513660..514271 (+) | 612 | WP_000475325.1 | staphylococcal enterotoxin-like toxin X | - |
| QAO35_RS02320 (QAO35_02320) | - | 514640..515008 (+) | 369 | WP_000849163.1 | YxeA family protein | - |
| QAO35_RS02325 (QAO35_02325) | - | 515189..515761 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| QAO35_RS02330 (QAO35_02330) | - | 515898..516161 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS02335 (QAO35_02335) | - | 516461..516712 (+) | 252 | WP_000466748.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=818197 QAO35_RS02175 WP_000934799.1 494419..494922(+) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=818197 QAO35_RS02175 WP_000934799.1 494419..494922(+) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |