Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO32_RS13655 | Genome accession | NZ_CP123070 |
| Coordinates | 2734792..2735262 (+) | Length | 156 a.a. |
| NCBI ID | WP_000610648.1 | Uniprot ID | A0A090M1W2 |
| Organism | Staphylococcus aureus strain SW-MSSA64 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2718479..2741820 | 2734792..2735262 | within | 0 |
Gene organization within MGE regions
Location: 2718479..2741820
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO32_RS13530 (QAO32_13515) | - | 2718479..2719702 (-) | 1224 | WP_000206615.1 | ArgE/DapE family deacylase | - |
| QAO32_RS13535 (QAO32_13520) | - | 2720133..2721188 (+) | 1056 | WP_000791399.1 | leukocidin family pore-forming toxin | - |
| QAO32_RS13540 (QAO32_13525) | - | 2721210..2722229 (+) | 1020 | WP_000595616.1 | leukocidin/hemolysin toxin family protein | - |
| QAO32_RS13545 (QAO32_13530) | sph | 2722486..2723310 (-) | 825 | Protein_2629 | sphingomyelin phosphodiesterase | - |
| QAO32_RS13550 (QAO32_13535) | - | 2723367..2724404 (-) | 1038 | WP_000857191.1 | tyrosine-type recombinase/integrase | - |
| QAO32_RS13555 (QAO32_13540) | - | 2724463..2724927 (-) | 465 | WP_000825947.1 | hypothetical protein | - |
| QAO32_RS13560 (QAO32_13545) | - | 2725027..2725209 (-) | 183 | WP_000705248.1 | hypothetical protein | - |
| QAO32_RS13565 (QAO32_13550) | - | 2725413..2725754 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| QAO32_RS13570 (QAO32_13555) | - | 2725760..2726692 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| QAO32_RS13575 (QAO32_13560) | - | 2726708..2727421 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| QAO32_RS13580 (QAO32_13565) | - | 2727384..2727557 (+) | 174 | WP_031908048.1 | hypothetical protein | - |
| QAO32_RS13585 (QAO32_13570) | - | 2727554..2727817 (+) | 264 | WP_000854073.1 | helix-turn-helix transcriptional regulator | - |
| QAO32_RS13590 (QAO32_13575) | - | 2727833..2728048 (+) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| QAO32_RS13595 (QAO32_13580) | - | 2728037..2728366 (-) | 330 | WP_000128907.1 | hypothetical protein | - |
| QAO32_RS13600 (QAO32_13585) | - | 2728417..2729169 (+) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO32_RS13605 (QAO32_13590) | - | 2729185..2729382 (+) | 198 | WP_001148862.1 | hypothetical protein | - |
| QAO32_RS13610 (QAO32_13595) | - | 2729369..2729749 (-) | 381 | WP_000762519.1 | DUF2513 domain-containing protein | - |
| QAO32_RS13615 (QAO32_13600) | - | 2729804..2730127 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| QAO32_RS13620 (QAO32_13605) | - | 2730124..2730285 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| QAO32_RS13625 (QAO32_13610) | - | 2730380..2730682 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| QAO32_RS13630 (QAO32_13615) | - | 2730687..2730947 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| QAO32_RS13635 (QAO32_13620) | - | 2730956..2731219 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| QAO32_RS13640 (QAO32_13625) | - | 2731228..2733171 (+) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| QAO32_RS13645 (QAO32_13630) | - | 2733173..2734093 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| QAO32_RS13650 (QAO32_13635) | - | 2734174..2734791 (+) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| QAO32_RS13655 (QAO32_13640) | ssbA | 2734792..2735262 (+) | 471 | WP_000610648.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO32_RS13660 (QAO32_13645) | - | 2735292..2736185 (+) | 894 | WP_000148321.1 | DnaD domain protein | - |
| QAO32_RS13665 (QAO32_13650) | - | 2736192..2736410 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| QAO32_RS13670 (QAO32_13655) | - | 2736419..2736823 (+) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAO32_RS13675 (QAO32_13660) | - | 2736836..2737204 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAO32_RS13680 (QAO32_13665) | - | 2737208..2737450 (+) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| QAO32_RS13685 (QAO32_13670) | - | 2737465..2737719 (+) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| QAO32_RS13690 (QAO32_13675) | - | 2737848..2738977 (+) | 1130 | WP_098686295.1 | IS3 family transposase | - |
| QAO32_RS13695 (QAO32_13680) | - | 2739095..2739631 (+) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| QAO32_RS13700 (QAO32_13685) | - | 2739668..2739913 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| QAO32_RS13705 (QAO32_13690) | - | 2739910..2740116 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| QAO32_RS13710 (QAO32_13695) | - | 2740113..2740499 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| QAO32_RS13715 (QAO32_13700) | rinB | 2740496..2740645 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| QAO32_RS13720 (QAO32_13705) | - | 2740645..2740845 (+) | 201 | WP_001622114.1 | DUF1514 family protein | - |
| QAO32_RS13725 (QAO32_13710) | - | 2740873..2741289 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| QAO32_RS13730 (QAO32_13715) | - | 2741521..2741820 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=818151 QAO32_RS13655 WP_000610648.1 2734792..2735262(+) (ssbA) [Staphylococcus aureus strain SW-MSSA64]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=818151 QAO32_RS13655 WP_000610648.1 2734792..2735262(+) (ssbA) [Staphylococcus aureus strain SW-MSSA64]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |