Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | R8619_RS00110 | Genome accession | NZ_AP026918 |
| Coordinates | 21282..21518 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | A0A0H2ZMA7 |
| Organism | Streptococcus pneumoniae strain PZ900700009 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 16282..26518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8619_RS00105 | - | 20235..21016 (-) | 782 | Protein_14 | transposase | - |
| R8619_RS00110 (PC0009_00160) | comW | 21282..21518 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| R8619_RS00115 (PC0009_00170) | - | 21749..23035 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| R8619_RS00120 (PC0009_00180) | tadA | 23236..23703 (+) | 468 | WP_000291870.1 | tRNA adenosine(34) deaminase TadA | - |
| R8619_RS00130 (PC0009_00190) | - | 23889..24332 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| R8619_RS00135 (PC0009_00200) | - | 24334..24849 (+) | 516 | WP_001842035.1 | histidine phosphatase family protein | - |
| R8619_RS00140 (PC0009_00210) | radA | 24863..26224 (+) | 1362 | WP_074017595.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=81789 R8619_RS00110 WP_000939545.1 21282..21518(+) (comW) [Streptococcus pneumoniae strain PZ900700009]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=81789 R8619_RS00110 WP_000939545.1 21282..21518(+) (comW) [Streptococcus pneumoniae strain PZ900700009]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTAAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTAAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |