Detailed information NTG0817787

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: R3L09_RS16270
• Genome accession: NZ_CP137064
• Coordinates: 3270896..3272014 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SNUBHAB0292
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3265896..3277014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L09_RS16260 (R3L09_16275)	-	3269012..3269704 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
R3L09_RS16265 (R3L09_16280)	pilT	3269831..3270868 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
R3L09_RS16270 (R3L09_16285)	pilU	3270896..3272014 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
R3L09_RS16275 (R3L09_16290)	fur	3272084..3272521 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
R3L09_RS16280 (R3L09_16295)	-	3272633..3273031 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
R3L09_RS16285 (R3L09_16300)	-	3273086..3273409 (-)	324	WP_000442587.1	RnfH family protein	-
R3L09_RS16290 (R3L09_16305)	-	3273409..3274476 (-)	1068	WP_002019572.1	hypothetical protein	-
R3L09_RS16295 (R3L09_16310)	-	3274629..3275084 (-)	456	WP_000782976.1	bacteriohemerythrin	-
R3L09_RS16300 (R3L09_16315)	-	3275337..3276185 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=817787 R3L09_RS16270 WP_000347039.1 3270896..3272014(+) (pilU) [Acinetobacter baumannii strain SNUBHAB0292]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=817787 R3L09_RS16270 WP_000347039.1 3270896..3272014(+) (pilU) [Acinetobacter baumannii strain SNUBHAB0292]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395