Detailed information NTG0817342

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAP00_RS05655
• Genome accession: NZ_CP122949
• Coordinates: 1174841..1175641 (-)
• Length: 266 a.a.
• NCBI ID: WP_129074697.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS22
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1169841..1180641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAP00_RS05615 (QAP00_05620)	-	1170812..1171597 (-)	786	WP_309256255.1	hypothetical protein	-
QAP00_RS05620 (QAP00_05625)	-	1171603..1171989 (-)	387	WP_309256256.1	DUF1294 domain-containing protein	-
QAP00_RS05625 (QAP00_05630)	-	1172317..1172706 (-)	390	WP_309256257.1	lysozyme	-
QAP00_RS05630 (QAP00_05635)	-	1172818..1172997 (-)	180	WP_309256258.1	lysozyme	-
QAP00_RS05635 (QAP00_05640)	-	1173008..1173568 (-)	561	WP_309256259.1	hypothetical protein	-
QAP00_RS05640 (QAP00_05645)	-	1173552..1173890 (-)	339	WP_000699911.1	hypothetical protein	-
QAP00_RS05645 (QAP00_05650)	-	1174075..1174333 (-)	259	Protein_1097	sel1 repeat family protein	-
QAP00_RS05650 (QAP00_05655)	dprB	1174440..1174844 (-)	405	WP_219027957.1	Holliday junction resolvase RuvX	Machinery gene
QAP00_RS05655 (QAP00_05660)	dprA	1174841..1175641 (-)	801	WP_129074697.1	DNA-processing protein DprA	Machinery gene
QAP00_RS05660 (QAP00_05665)	minE	1175653..1175886 (-)	234	WP_000051411.1	cell division topological specificity factor MinE	-
QAP00_RS05665 (QAP00_05670)	minD	1175883..1176689 (-)	807	WP_309256260.1	septum site-determining protein MinD	-
QAP00_RS05670 (QAP00_05675)	ilvC	1176714..1177706 (-)	993	WP_309256261.1	ketol-acid reductoisomerase	-
QAP00_RS05680 (QAP00_05685)	-	1177955..1178737 (+)	783	WP_309256262.1	NAD+ synthase	-
QAP00_RS05685 (QAP00_05690)	-	1178734..1179672 (+)	939	WP_309256263.1	tetraacyldisaccharide 4'-kinase	-
QAP00_RS05690 (QAP00_05695)	pseH	1179605..1180147 (-)	543	WP_309256264.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29768.67 Da
• Isoelectric Point: 8.5925

>NTDB_id=817342 QAP00_RS05655 WP_129074697.1 1174841..1175641(-) (dprA) [Helicobacter pylori strain BS22]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFVYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=817342 QAP00_RS05655 WP_129074697.1 1174841..1175641(-) (dprA) [Helicobacter pylori strain BS22]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTGTCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGTAGCGCTAGACTCGCCCAAAAGTATCAAAAACCCTTATTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41