Detailed information NTG0816024

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: QAO16_RS09140
• Genome accession: NZ_CP122489
• Coordinates: 1790445..1790948 (-)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain GE-MSSA42
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1785445..1795948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAO16_RS09095 (QAO16_09095)	-	1785484..1785843 (-)	360	WP_001038252.1	hypothetical protein	-
QAO16_RS09100 (QAO16_09100)	tscA	1785845..1786057 (-)	213	WP_001058496.1	type II toxin-antitoxin system antitoxin TscA	-
QAO16_RS09105 (QAO16_09105)	-	1786050..1786196 (-)	147	WP_000784893.1	hypothetical protein	-
QAO16_RS09110 (QAO16_09110)	-	1786208..1786480 (-)	273	WP_115300111.1	helix-turn-helix domain-containing protein	-
QAO16_RS09115 (QAO16_09115)	-	1786481..1786693 (-)	213	WP_044292240.1	helix-turn-helix domain-containing protein	-
QAO16_RS09120 (QAO16_09120)	-	1786880..1787599 (+)	720	WP_115300110.1	helix-turn-helix domain-containing protein	-
QAO16_RS09125 (QAO16_09125)	-	1787873..1789087 (+)	1215	WP_000270135.1	tyrosine-type recombinase/integrase	-
QAO16_RS09130 (QAO16_09130)	-	1789200..1789919 (+)	720	WP_000400841.1	type II toxin-antitoxin system PemK/MazF family toxin	-
QAO16_RS09135 (QAO16_09135)	rpsR	1790151..1790393 (-)	243	WP_000897044.1	30S ribosomal protein S18	-
QAO16_RS09140 (QAO16_09140)	ssbA	1790445..1790948 (-)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
QAO16_RS09145 (QAO16_09145)	rpsF	1790969..1791265 (-)	297	WP_001261460.1	30S ribosomal protein S6	-
QAO16_RS09150 (QAO16_09150)	-	1791509..1791700 (+)	192	WP_001052483.1	hypothetical protein	-
QAO16_RS09155 (QAO16_09155)	ychF	1791786..1792883 (-)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
QAO16_RS09160 (QAO16_09160)	-	1792895..1793098 (-)	204	WP_000157348.1	DUF951 domain-containing protein	-
QAO16_RS09165 (QAO16_09165)	-	1793128..1794009 (-)	882	WP_000373076.1	mechanosensitive ion channel family protein	-
QAO16_RS09170 (QAO16_09170)	-	1794163..1795008 (-)	846	WP_001573568.1	ParB/RepB/Spo0J family partition protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=816024 QAO16_RS09140 WP_000934799.1 1790445..1790948(-) (ssbA) [Staphylococcus aureus strain GE-MSSA42]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=816024 QAO16_RS09140 WP_000934799.1 1790445..1790948(-) (ssbA) [Staphylococcus aureus strain GE-MSSA42]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365