Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO45_RS13345 | Genome accession | NZ_CP122483 |
| Coordinates | 2715430..2715900 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain SW-MSSA66 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2698357..2720946 | 2715430..2715900 | within | 0 |
Gene organization within MGE regions
Location: 2698357..2720946
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO45_RS13215 (QAO45_13255) | - | 2698357..2699580 (-) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| QAO45_RS13220 (QAO45_13260) | lukH | 2700016..2701071 (+) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| QAO45_RS13225 (QAO45_13265) | lukG | 2701093..2702109 (+) | 1017 | WP_411893130.1 | bi-component leukocidin LukGH subunit G | - |
| QAO45_RS13230 (QAO45_13270) | sph | 2702347..2703171 (-) | 825 | Protein_2563 | sphingomyelin phosphodiesterase | - |
| QAO45_RS13235 (QAO45_13275) | - | 2703228..2704265 (-) | 1038 | WP_000857180.1 | tyrosine-type recombinase/integrase | - |
| QAO45_RS13240 (QAO45_13280) | - | 2704328..2704570 (-) | 243 | WP_000427213.1 | hypothetical protein | - |
| QAO45_RS13245 (QAO45_13285) | - | 2704581..2705564 (-) | 984 | WP_001558608.1 | glycosyltransferase family 2 protein | - |
| QAO45_RS13250 (QAO45_13290) | - | 2705664..2705846 (-) | 183 | WP_000694772.1 | hypothetical protein | - |
| QAO45_RS13255 (QAO45_13295) | - | 2706050..2706391 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| QAO45_RS13260 (QAO45_13300) | - | 2706397..2707329 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| QAO45_RS13265 (QAO45_13305) | - | 2707345..2708058 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| QAO45_RS13270 (QAO45_13310) | - | 2708021..2708195 (+) | 175 | Protein_2571 | transcriptional regulator | - |
| QAO45_RS13275 (QAO45_13315) | - | 2708192..2708455 (+) | 264 | Protein_2572 | helix-turn-helix transcriptional regulator | - |
| QAO45_RS13280 (QAO45_13320) | - | 2708471..2708686 (+) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| QAO45_RS13285 (QAO45_13325) | - | 2708675..2709004 (-) | 330 | WP_000128909.1 | hypothetical protein | - |
| QAO45_RS13290 (QAO45_13330) | - | 2709055..2709807 (+) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO45_RS13295 (QAO45_13335) | - | 2709823..2710020 (+) | 198 | WP_001148856.1 | hypothetical protein | - |
| QAO45_RS13300 (QAO45_13340) | - | 2710007..2710387 (-) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| QAO45_RS13305 (QAO45_13345) | - | 2710442..2710765 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| QAO45_RS13310 (QAO45_13350) | - | 2710762..2710923 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| QAO45_RS13315 (QAO45_13355) | - | 2711018..2711320 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| QAO45_RS13320 (QAO45_13360) | - | 2711325..2711585 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| QAO45_RS13325 (QAO45_13365) | - | 2711594..2711857 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| QAO45_RS13330 (QAO45_13370) | - | 2711866..2713809 (+) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| QAO45_RS13335 (QAO45_13375) | - | 2713811..2714731 (+) | 921 | WP_000180600.1 | recombinase RecT | - |
| QAO45_RS13340 (QAO45_13380) | - | 2714812..2715429 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| QAO45_RS13345 (QAO45_13385) | ssbA | 2715430..2715900 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO45_RS13350 (QAO45_13390) | - | 2715930..2716823 (+) | 894 | WP_000148333.1 | DnaD domain protein | - |
| QAO45_RS13355 (QAO45_13395) | - | 2716830..2717048 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| QAO45_RS13360 (QAO45_13400) | - | 2717057..2717461 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAO45_RS13365 (QAO45_13405) | - | 2717474..2717845 (+) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAO45_RS13370 (QAO45_13410) | - | 2717845..2718102 (+) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| QAO45_RS13375 (QAO45_13415) | - | 2718105..2718347 (+) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| QAO45_RS13380 (QAO45_13420) | - | 2718362..2718607 (+) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| QAO45_RS13385 (QAO45_13425) | - | 2718604..2719140 (+) | 537 | WP_000185693.1 | dUTPase | - |
| QAO45_RS13390 (QAO45_13430) | - | 2719177..2719422 (+) | 246 | WP_001282077.1 | hypothetical protein | - |
| QAO45_RS13395 (QAO45_13435) | - | 2719419..2719625 (+) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| QAO45_RS13400 (QAO45_13440) | rinB | 2719622..2719771 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| QAO45_RS13405 (QAO45_13445) | - | 2719771..2719971 (+) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| QAO45_RS13410 (QAO45_13450) | - | 2719999..2720415 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| QAO45_RS13415 (QAO45_13455) | - | 2720647..2720946 (+) | 300 | WP_000988332.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=815783 QAO45_RS13345 WP_000934759.1 2715430..2715900(+) (ssbA) [Staphylococcus aureus strain SW-MSSA66]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=815783 QAO45_RS13345 WP_000934759.1 2715430..2715900(+) (ssbA) [Staphylococcus aureus strain SW-MSSA66]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |