Detailed information NTG0814208

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PM3_RS09375
• Genome accession: NZ_CP121788
• Coordinates: 1990800..1991921 (+)
• Length: 373 a.a.
• NCBI ID: WP_217883937.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain PM-3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1985800..1996921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PM3_RS09355 (PM3_1829)	napG	1987980..1988732 (+)	753	WP_005752143.1	ferredoxin-type protein NapG	-
PM3_RS09360 (PM3_1830)	napH	1988732..1989607 (+)	876	WP_005724438.1	quinol dehydrogenase ferredoxin subunit NapH	-
PM3_RS09365 (PM3_1831)	-	1989613..1990038 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
PM3_RS09370 (PM3_1832)	-	1990054..1990647 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
PM3_RS09375 (PM3_1833)	dprA	1990800..1991921 (+)	1122	WP_217883937.1	DNA-processing protein DprA	Machinery gene
PM3_RS09380 (PM3_1834)	lptD	1992027..1994375 (-)	2349	WP_061406345.1	LPS assembly protein LptD	-
PM3_RS09385 (PM3_1835)	-	1994439..1994990 (-)	552	WP_061406346.1	DNA-3-methyladenine glycosylase I	-
PM3_RS09390 (PM3_1836)	tal	1995148..1996101 (+)	954	WP_005755204.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41697.89 Da
• Isoelectric Point: 6.2635

>NTDB_id=814208 PM3_RS09375 WP_217883937.1 1990800..1991921(+) (dprA) [Pasteurella multocida strain PM-3]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQIGWTTQQIQRWFTPENRYIDPTLAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGVILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=814208 PM3_RS09375 WP_217883937.1 1990800..1991921(+) (dprA) [Pasteurella multocida strain PM-3]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGACACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCACGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCTCCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCACGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGTAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAGGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACTTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGTAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-275)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	59.73	99.196	0.592
dprA	Glaesserella parasuis strain SC1401	52.286	93.834	0.491
dprA	Vibrio cholerae strain A1552	45.187	100	0.453
dprA	Vibrio campbellii strain DS40M4	44.595	99.196	0.442
dprA	Legionella pneumophila strain ERS1305867	39.084	99.464	0.389