Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   P8P68_RS08690 Genome accession   NZ_CP121467
Coordinates   1782529..1784490 (+) Length   653 a.a.
NCBI ID   WP_000594275.1    Uniprot ID   K1A783
Organism   Streptococcus sp. D7B5     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1777529..1789490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS08680 (P8P68_08680) - 1778635..1780245 (+) 1611 WP_278275875.1 alpha-glucosidase -
  P8P68_RS08685 (P8P68_08685) amiA 1780415..1782382 (+) 1968 WP_084945100.1 peptide ABC transporter substrate-binding protein Regulator
  P8P68_RS08690 (P8P68_08690) amiA3 1782529..1784490 (+) 1962 WP_000594275.1 peptide ABC transporter substrate-binding protein Regulator
  P8P68_RS08695 (P8P68_08695) - 1784682..1786127 (+) 1446 WP_000091224.1 LCP family protein -
  P8P68_RS08700 (P8P68_08700) cps4B 1786129..1786860 (+) 732 WP_000565332.1 capsular polysaccharide biosynthesis protein Cps4B -
  P8P68_RS08705 (P8P68_08705) cpsC 1786869..1787561 (+) 693 WP_000664124.1 capsular polysaccharide biosynthesis protein CpsC -
  P8P68_RS08710 (P8P68_08710) - 1787571..1788263 (+) 693 WP_278275876.1 tyrosine-protein kinase -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73088.33 Da        Isoelectric Point: 4.7970

>NTDB_id=812261 P8P68_RS08690 WP_000594275.1 1782529..1784490(+) (amiA3) [Streptococcus sp. D7B5]
MIKMKKRLIGTGLVLATGILLSSCGQSNTDTSTYSSTFSANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLVPALA
EDWSVSSDGLTYTYKLRKDAKWYTADGEEYASVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKDFGTLTPDSILYNGPYLLKDFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSIAGVYPNSSNYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKTYNHTAKTTD
EQKKSAQTAILNKNFRQAINFGIDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVTASKLVNYGTEWSGINLA
DAQDAYFNKEKAQAKFAEAKKELEAQGVTFPIHLDVPVDQTNKNAVSGMNSVKQTLETVLGSDNIVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAETGFYLKIFGLDAKEDQELIKSLGLDTYTQLLKEADAENKDVAKR
YEKYAEAQAWMIDNSLVMSAMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKAKWEEESKKA
IEKSQKEFENHVK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=812261 P8P68_RS08690 WP_000594275.1 1782529..1784490(+) (amiA3) [Streptococcus sp. D7B5]
ATGATCAAAATGAAAAAAAGACTAATCGGGACAGGTCTTGTCTTAGCGACAGGTATTTTGCTCTCGTCATGTGGACAGTC
CAATACAGATACTAGCACTTATTCATCAACATTTAGTGCAAATCCGACAACTTTTAACTATCTTCTAGATTATTATGCGG
ATAACACTGCCGTTATTACCAATCTCGTAGATGGTTTGTTAGAAAATGACAGCTATGGGAACCTCGTACCTGCTCTTGCG
GAGGATTGGTCTGTTTCATCAGATGGTTTGACCTATACCTACAAGCTTAGAAAAGATGCCAAGTGGTATACAGCTGATGG
TGAGGAATATGCTTCAGTTAAAGCTCAGGATTTTGTCACTGGGATCAAATATGCCGCGGACAACAAGGGACAAGCTATGG
ATCTGATCCAAAATTCAATCAAGGGATTGAATGACTATGTGACGGGTGTGACCAATGATTTTTCAACTGTTGGTGTCAAA
GCCTTGGATGATTACACAGTCGAGTACACCTTGACTCGACCAGAACCTTATTGGAACTCTAAGACAACCAATAGTATTCT
TTTCCCAGTCAACGAAGAGTTTTTGAAATCAAAAGATAAAGACTTTGGTACCTTGACACCAGACAGTATCCTTTATAACG
GTCCCTATCTGTTAAAAGATTTCACATCAAAATCTTCGATCGAATATGTGAAGAATCCACACTATTATGATCATGATAAA
GTAACCATTGAAAAAGTTAAGTTAGCTTACTTTGATGGGTCAGATCAGGAGATGACCATTCGAAACTTTGAAAGTGGTGC
TTACTCGATTGCAGGAGTCTATCCAAATAGTTCGAACTATGCTAAGACAAAAGAAAAATACCAAGACAATATCGTCTATA
GCTTACAAGACAAGACATCTTGGTACTTTAACTTTAACGTCAACCGCAAAACCTATAATCATACCGCTAAAACAACGGAC
GAACAAAAGAAATCAGCTCAAACAGCTATCTTAAATAAAAATTTCCGTCAGGCTATCAACTTTGGAATTGATCGAACAGC
CTACTCTGCTCAATCTAACGGTGAAGAAGCAGCGAGCAAAACCCTTCGTAATACTCTGGTTCCCCCAACATTTGTCCAGG
TGGGAGATAAGACCTTTGGAGAAGTAACAGCTTCTAAGCTTGTGAACTACGGAACTGAGTGGTCAGGTATCAATTTGGCA
GATGCTCAAGATGCCTACTTTAACAAGGAAAAGGCCCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTGGAAGCCCAAGG
TGTGACTTTCCCAATCCATTTGGATGTCCCTGTTGATCAGACAAACAAAAATGCGGTTTCTGGTATGAACTCGGTTAAAC
AAACCCTTGAAACAGTACTAGGTTCTGACAATATCGTCATTGATGTTCAACAGCTTTCTACAGATGACTTTGGAAATGTT
GCTTTCTTAGCACCAAATCCAGCAGCTCGTGACTACGACCTAAACTTTGATGGTTGGGTTGGTGATTACCAGGATCCATC
GACTTATCTAGACCCCTTCAATGCTGAAACTGGCTTCTATCTCAAGATTTTTGGTCTTGATGCCAAGGAAGACCAAGAGC
TCATTAAGAGTTTGGGGCTCGATACCTATACACAACTCCTGAAAGAAGCAGATGCTGAGAATAAAGATGTCGCTAAGCGT
TATGAAAAATACGCTGAAGCTCAAGCTTGGATGATTGACAATTCTCTAGTTATGTCTGCTATGTCAAATGGTGGTACAGC
CTCTGTAACCAAAGTAACTCCGTTTACACGTGCCTACTCCCTAGTGGGAATCAAGGGTGACGGAAATAATTATAAGTACA
TGAGATTACAAAAAGACCCTGTTACCAAGAAACAATTTGATGAAGCCAAGGCTAAGTGGGAAGAAGAAAGTAAAAAGGCT
ATCGAAAAGAGCCAAAAAGAGTTTGAAAACCACGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB K1A783

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

51.446

100

0.518
  amiA3 Streptococcus thermophilus LMG 18311

51.294

100

0.516
  amiA Streptococcus salivarius strain HSISS4

50.762

100

0.51