Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   P3S51_RS00915 Genome accession   NZ_CP121303
Coordinates   185394..186551 (-) Length   385 a.a.
NCBI ID   WP_311918124.1    Uniprot ID   A0AB35UVY0
Organism   Acinetobacter sp. ANC 7201     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 180394..191551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3S51_RS00880 (P3S51_00880) - 180407..180631 (-) 225 WP_311918117.1 hypothetical protein -
  P3S51_RS00885 (P3S51_00885) - 180681..181121 (-) 441 WP_311918118.1 AAA family ATPase -
  P3S51_RS00890 (P3S51_00890) priC 181164..181733 (-) 570 WP_311918119.1 primosomal replication protein PriC -
  P3S51_RS00895 (P3S51_00895) - 181874..182416 (-) 543 WP_311918120.1 glutathione peroxidase -
  P3S51_RS00900 (P3S51_00900) - 182606..183355 (-) 750 WP_311918121.1 AraC family transcriptional regulator -
  P3S51_RS00905 (P3S51_00905) - 183506..184390 (+) 885 WP_311918122.1 DMT family transporter -
  P3S51_RS00910 (P3S51_00910) - 184785..185354 (-) 570 WP_311918123.1 L-threonylcarbamoyladenylate synthase -
  P3S51_RS00915 (P3S51_00915) dprA 185394..186551 (-) 1158 WP_311918124.1 DNA-processing protein DprA Machinery gene
  P3S51_RS00920 (P3S51_00920) tsaP 186562..187719 (-) 1158 WP_311918125.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  P3S51_RS00925 (P3S51_00925) def 187840..188370 (+) 531 WP_154773704.1 peptide deformylase -
  P3S51_RS00930 (P3S51_00930) - 188455..188877 (+) 423 WP_311918435.1 DUF2946 family protein -
  P3S51_RS00935 (P3S51_00935) - 188949..191018 (+) 2070 WP_311918126.1 TonB-dependent copper receptor -

Sequence

Protein


Download         Length: 385 a.a.        Molecular weight: 43290.15 Da        Isoelectric Point: 6.6154

>NTDB_id=811728 P3S51_RS00915 WP_311918124.1 185394..186551(-) (dprA) [Acinetobacter sp. ANC 7201]
MLSHLSKSQTETIAIWYVVQHSLSSFYKIQKHFKALEHALKPENISQWQNLALHKNHLQRLEKFHTSEGQNDFQQLLNQI
KQSSDFVLIETDSCYPTQLLPYSDRPPIIFGQGNAQILLQPQVAIVGSRKSSTHGRQVAYDFAYYLSEKGFYINSGLAQG
IDEASHQGGLKNQRTIAVMGTGLDITYPSQNTTLRQDIIKNNGAVITEFLPTTKPLQQHFPRRNRIVSGLSLGVIVAEAT
LESGSLITAKLAAEQGKLIFAIPGHIYSEFHQGCHQLIREGAILIDHPEQVIEDLALPTQWQAKQVETQNTSSKLFEKNN
DESSDIPDYLITLYKQLDWVGQDIDQLAAILNLDIATLTAYLMELELSGLCMQQSGLYVRCRSNK

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=811728 P3S51_RS00915 WP_311918124.1 185394..186551(-) (dprA) [Acinetobacter sp. ANC 7201]
ATGTTGAGCCATTTATCAAAATCTCAAACTGAAACAATTGCGATCTGGTACGTGGTTCAACACTCTCTATCTAGTTTTTA
TAAAATTCAAAAACATTTCAAAGCACTTGAACACGCATTAAAACCAGAAAATATTAGCCAATGGCAAAATTTAGCACTAC
ATAAAAACCATCTTCAGCGTTTAGAAAAATTTCACACTTCAGAAGGTCAAAATGACTTTCAACAATTACTCAATCAAATT
AAACAATCTTCAGATTTTGTTCTTATAGAAACAGATTCCTGCTATCCAACTCAGCTTTTACCTTATAGCGATAGACCGCC
TATTATTTTTGGGCAAGGTAATGCCCAAATCCTTTTACAACCTCAAGTTGCAATTGTAGGTAGTCGTAAATCAAGCACGC
ATGGTCGACAAGTTGCATATGACTTCGCTTACTATTTAAGTGAAAAAGGTTTTTATATTAATAGTGGATTAGCACAAGGA
ATAGATGAAGCTTCGCATCAAGGTGGATTAAAAAATCAACGTACAATTGCTGTTATGGGCACAGGTTTAGACATCACCTA
TCCATCTCAAAATACAACATTAAGACAAGACATTATTAAGAATAATGGTGCAGTGATTACAGAGTTTCTACCAACAACTA
AACCATTACAACAACATTTTCCAAGAAGAAATCGAATTGTTAGTGGATTAAGCCTAGGTGTTATTGTGGCTGAAGCAACG
TTAGAGAGCGGTTCACTTATTACCGCTAAACTTGCGGCTGAGCAAGGTAAATTAATTTTTGCAATTCCTGGTCATATCTA
CAGCGAATTTCATCAAGGATGCCATCAACTTATACGTGAAGGTGCAATTTTAATTGACCATCCCGAACAAGTTATTGAAG
ACTTAGCCCTACCAACCCAATGGCAAGCTAAACAAGTAGAAACTCAAAATACATCATCAAAATTATTTGAAAAAAATAAT
GATGAATCATCTGATATTCCAGATTATTTAATTACTTTATATAAACAACTCGATTGGGTTGGACAAGATATAGACCAACT
TGCAGCAATACTAAATCTTGATATTGCTACGCTTACAGCTTACTTAATGGAATTAGAATTAAGTGGATTATGCATGCAAC
AATCTGGCCTATATGTACGTTGTCGTTCCAATAAATAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(87-285)

DprA winged helix domain (DprA_WH)

(337-376)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

65.796

99.481

0.655
  dprA Acinetobacter baumannii D1279779

65.274

99.481

0.649
  dprA Acinetobacter baylyi ADP1

62.371

100

0.629