Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   P3S51_RS00920 Genome accession   NZ_CP121303
Coordinates   186562..187719 (-) Length   385 a.a.
NCBI ID   WP_311918125.1    Uniprot ID   -
Organism   Acinetobacter sp. ANC 7201     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 181562..192719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3S51_RS00895 (P3S51_00895) - 181874..182416 (-) 543 WP_311918120.1 glutathione peroxidase -
  P3S51_RS00900 (P3S51_00900) - 182606..183355 (-) 750 WP_311918121.1 AraC family transcriptional regulator -
  P3S51_RS00905 (P3S51_00905) - 183506..184390 (+) 885 WP_311918122.1 DMT family transporter -
  P3S51_RS00910 (P3S51_00910) - 184785..185354 (-) 570 WP_311918123.1 L-threonylcarbamoyladenylate synthase -
  P3S51_RS00915 (P3S51_00915) dprA 185394..186551 (-) 1158 WP_311918124.1 DNA-processing protein DprA Machinery gene
  P3S51_RS00920 (P3S51_00920) tsaP 186562..187719 (-) 1158 WP_311918125.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  P3S51_RS00925 (P3S51_00925) def 187840..188370 (+) 531 WP_154773704.1 peptide deformylase -
  P3S51_RS00930 (P3S51_00930) - 188455..188877 (+) 423 WP_311918435.1 DUF2946 family protein -
  P3S51_RS00935 (P3S51_00935) - 188949..191018 (+) 2070 WP_311918126.1 TonB-dependent copper receptor -

Sequence

Protein


Download         Length: 385 a.a.        Molecular weight: 42296.61 Da        Isoelectric Point: 9.3595

>NTDB_id=811729 P3S51_RS00920 WP_311918125.1 186562..187719(-) (tsaP) [Acinetobacter sp. ANC 7201]
MKKVLKDTSSLRVLGFKKQILALAVCFGVGLGTISIAEAAPSRNVNPPALKANAPHVYIVKKGDTLWDISKKFLKNPYRW
REIWASNKHVKNPHWIFPGDRLLMCTYNGRPIIGKDEGDGCDGIIRRYGNETINLQPQVRVESLNNTIPVIPLDGIKNWL
ERSNIVPVNSTKNMPYVVGAKDQRVLAAKGQNIYVRGNGLEIGQRYSVYRENDPYIMLDAKGKKYNAGLELVEVASGIAT
KQAGDITTLEVTDSYNSEIRRGYFVMQEYEAMLPTLFYPVNAEEVIAGGKVIRVQGSIGAAAVGSVVSLDRGTNQGVKVG
HVFNVNELGQAVKDQVTNETIQLPSENVGSVMVFKAFDNISYAYVLESSLPINVGAALTPPIMND

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=811729 P3S51_RS00920 WP_311918125.1 186562..187719(-) (tsaP) [Acinetobacter sp. ANC 7201]
ATGAAAAAGGTTTTGAAGGACACATCTTCTTTGCGTGTCTTGGGGTTTAAAAAACAAATTCTTGCTCTTGCTGTTTGCTT
TGGCGTTGGTCTAGGTACAATTAGCATTGCAGAAGCTGCGCCTTCTCGCAATGTTAATCCGCCTGCATTAAAAGCAAATG
CACCTCATGTTTATATTGTGAAAAAGGGCGATACGCTTTGGGATATTTCAAAAAAATTCCTCAAAAATCCGTACCGCTGG
CGTGAAATTTGGGCAAGCAATAAACATGTGAAAAATCCACATTGGATTTTCCCTGGTGACCGCTTACTCATGTGTACTTA
TAACGGTCGCCCAATTATTGGTAAAGATGAAGGTGATGGCTGTGATGGTATTATTCGTCGCTATGGCAATGAAACCATTA
ACTTACAACCACAAGTTCGCGTAGAATCTTTAAACAATACTATTCCAGTAATTCCATTAGATGGCATTAAAAACTGGTTA
GAACGTTCAAATATTGTTCCTGTAAATTCTACTAAAAACATGCCTTATGTTGTTGGTGCTAAAGATCAGCGAGTACTTGC
CGCAAAAGGTCAGAATATTTATGTTCGTGGGAATGGCTTAGAAATAGGTCAGCGTTACAGCGTTTACCGTGAAAATGATC
CTTACATCATGCTTGATGCTAAAGGTAAAAAGTACAATGCAGGCTTAGAGCTTGTTGAGGTTGCATCAGGTATTGCAACA
AAGCAAGCTGGCGATATCACCACACTAGAAGTTACAGATTCTTATAATTCTGAAATTCGTCGTGGTTATTTCGTAATGCA
AGAATACGAAGCAATGTTACCAACACTATTTTATCCTGTGAATGCTGAAGAAGTGATTGCTGGTGGTAAAGTTATTCGTG
TTCAAGGCTCTATTGGCGCTGCGGCTGTTGGTAGCGTAGTTAGCCTTGACCGTGGTACAAACCAAGGTGTTAAAGTTGGA
CATGTTTTTAACGTAAATGAATTGGGTCAAGCCGTAAAAGACCAAGTTACGAATGAAACAATTCAGCTTCCTTCTGAAAA
TGTCGGTAGCGTTATGGTATTCAAAGCTTTTGACAACATTAGCTATGCTTATGTTTTAGAAAGCTCACTACCTATTAATG
TTGGTGCAGCACTTACGCCACCAATTATGAATGACTAG

Domains

Predicted by InterproScan.

LysM domain (LysM)

(58-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

62.078

100

0.621