Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | OCUAC_RS00980 | Genome accession | NZ_AP023077 |
| Coordinates | 216406..216987 (+) | Length | 193 a.a. |
| NCBI ID | WP_001215080.1 | Uniprot ID | A0A009T283 |
| Organism | Acinetobacter baumannii strain OCU_Ac16a | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 211406..221987
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCUAC_RS00955 | - | 212027..212380 (+) | 354 | WP_000580168.1 | DUF1304 domain-containing protein | - |
| OCUAC_RS00960 | - | 212433..212774 (+) | 342 | WP_004745324.1 | GlpM family protein | - |
| OCUAC_RS00965 | tenA | 212824..213498 (-) | 675 | WP_000899418.1 | thiaminase II | - |
| OCUAC_RS00970 | - | 213761..214843 (+) | 1083 | WP_072689571.1 | DUF475 domain-containing protein | - |
| OCUAC_RS00975 | - | 214990..216354 (+) | 1365 | WP_000980460.1 | MFS transporter | - |
| OCUAC_RS00980 | ssb | 216406..216987 (+) | 582 | WP_001215080.1 | single-stranded DNA-binding protein | Machinery gene |
| OCUAC_RS00985 | - | 217028..217351 (-) | 324 | WP_000082712.1 | AzlD domain-containing protein | - |
| OCUAC_RS00990 | - | 217348..218043 (-) | 696 | WP_072689574.1 | AzlC family ABC transporter permease | - |
| OCUAC_RS00995 | - | 218112..218660 (+) | 549 | WP_072689577.1 | helix-turn-helix domain-containing protein | - |
| OCUAC_RS01000 | - | 218966..220408 (+) | 1443 | WP_072689580.1 | amino acid permease | - |
| OCUAC_RS01005 | - | 220471..221970 (-) | 1500 | WP_001257162.1 | PLP-dependent aminotransferase family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20978.80 Da Isoelectric Point: 6.4822
>NTDB_id=81156 OCUAC_RS00980 WP_001215080.1 216406..216987(+) (ssb) [Acinetobacter baumannii strain OCU_Ac16a]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=81156 OCUAC_RS00980 WP_001215080.1 216406..216987(+) (ssb) [Acinetobacter baumannii strain OCU_Ac16a]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGACTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGACTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.5 |
100 |
0.534 |
| ssb | Vibrio cholerae strain A1552 |
43.564 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |