Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   P7Y79_RS04385 Genome accession   NZ_CP121207
Coordinates   908205..909533 (+) Length   442 a.a.
NCBI ID   WP_039696862.1    Uniprot ID   A0A091BVP1
Organism   Streptococcus ruminicola strain CNU_77-47     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 903205..914533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7Y79_RS04370 (P7Y79_04370) phoU 903946..904599 (+) 654 WP_039696860.1 phosphate signaling complex protein PhoU -
  P7Y79_RS04375 (P7Y79_04375) - 904831..907374 (+) 2544 WP_278007817.1 M1 family metallopeptidase -
  P7Y79_RS04380 (P7Y79_04380) ciaR 907541..908215 (+) 675 WP_074563738.1 response regulator transcription factor Regulator
  P7Y79_RS04385 (P7Y79_04385) ciaH 908205..909533 (+) 1329 WP_039696862.1 HAMP domain-containing sensor histidine kinase Regulator
  P7Y79_RS04390 (P7Y79_04390) rpsT 909618..909869 (-) 252 WP_004231769.1 30S ribosomal protein S20 -
  P7Y79_RS04395 (P7Y79_04395) coaA 909945..910865 (-) 921 WP_158913875.1 type I pantothenate kinase -
  P7Y79_RS04400 (P7Y79_04400) - 910997..911590 (+) 594 WP_157629041.1 class I SAM-dependent methyltransferase -
  P7Y79_RS04405 (P7Y79_04405) deoC 912092..912757 (+) 666 WP_074625712.1 deoxyribose-phosphate aldolase -
  P7Y79_RS04410 (P7Y79_04410) - 912951..914015 (+) 1065 WP_039696865.1 BMP family protein -

Sequence

Protein


Download         Length: 442 a.a.        Molecular weight: 50098.00 Da        Isoelectric Point: 6.6262

>NTDB_id=811102 P7Y79_RS04385 WP_039696862.1 908205..909533(+) (ciaH) [Streptococcus ruminicola strain CNU_77-47]
MLNNIHKKLSTGTFSNFFHFFIVFTGIFIIMTTIILQIMRYGLYSSVDTTLKNAADNASDYVTRTMERSDSLQSNNSFSN
SGKGKPSSNVASLSNVSVLLYDTNGKIVNAIDAFVQFGTLASSVDEDTIGEIKDEKMTTIFGQTEKYHVLTVRVYSSDYP
TIEYATFLISVSQLDEANERYVTITVSVMIIFWMISILASIYLANWMRKPILESYEKQKRFVENASHELRTPLAVLQNRL
ESLFRRPNATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEEIQPSIFNEIFENYNMIAEENGKTFVAHNS
ADRPIKTDRTLLKQLMTILFDNAIKYTDDDGFIEFTVKTTERQTILTVADNGPGISDADKAKIFDRFYRVDKARTRQKGG
FGLGLSLAKQIVDALKGDIQVKDNHPKGTIFEVRFNRHNFGK

Nucleotide


Download         Length: 1329 bp        

>NTDB_id=811102 P7Y79_RS04385 WP_039696862.1 908205..909533(+) (ciaH) [Streptococcus ruminicola strain CNU_77-47]
ATGCTGAATAACATACACAAAAAATTATCAACAGGAACGTTTTCTAATTTTTTCCATTTCTTCATTGTATTTACAGGAAT
TTTCATCATTATGACCACGATTATCTTGCAGATTATGCGTTATGGTCTATATTCTTCTGTAGATACCACTTTAAAAAATG
CAGCTGACAACGCAAGTGATTACGTCACACGAACAATGGAGCGTAGTGATTCCTTACAATCTAATAATAGTTTTAGTAAT
TCTGGAAAAGGAAAACCCAGCTCAAATGTGGCAAGTTTAAGTAATGTCAGTGTGCTATTGTACGATACAAATGGGAAAAT
CGTAAATGCAATTGATGCCTTTGTCCAGTTCGGGACATTAGCATCTAGTGTTGATGAAGACACTATTGGTGAGATTAAAG
ACGAGAAAATGACAACTATCTTTGGTCAAACCGAAAAATACCATGTTTTAACGGTTAGAGTGTATAGTAGCGACTATCCA
ACGATTGAATACGCGACTTTCTTAATCAGTGTTAGTCAGCTTGATGAGGCAAACGAACGTTATGTAACCATAACTGTTTC
AGTCATGATTATTTTCTGGATGATTTCAATTTTAGCAAGTATTTACTTGGCAAATTGGATGCGTAAACCAATTTTAGAAA
GTTATGAAAAACAAAAGCGTTTTGTTGAAAATGCTAGTCACGAATTAAGAACGCCGTTAGCGGTGCTTCAAAACCGACTT
GAAAGTCTTTTTAGACGACCGAATGCAACAATTCTTGATAACAGTGAAAGTATTGCAGCGAGTCTTGACGAAGTTCGTAA
TATGCGTATTTTAACAACCAATCTTTTGAACCTTGCTAGGCGAGATGATGGATTGAAAGTTGAATTAGAAGAAATCCAAC
CTTCAATCTTTAATGAAATTTTTGAGAATTACAACATGATTGCCGAAGAAAATGGTAAAACTTTTGTTGCTCATAATTCT
GCGGATCGTCCGATAAAAACTGATCGCACCTTGCTTAAACAATTGATGACAATCTTGTTTGATAATGCGATTAAGTACAC
TGATGACGACGGTTTTATTGAATTTACAGTTAAAACAACAGAACGCCAGACTATTCTAACCGTCGCTGATAATGGGCCGG
GTATTAGTGACGCTGATAAAGCGAAAATTTTTGATCGCTTTTATCGCGTTGATAAGGCAAGGACACGTCAAAAAGGTGGC
TTTGGACTTGGTCTATCCTTGGCTAAACAAATTGTTGATGCCTTAAAAGGTGATATTCAAGTTAAGGATAATCATCCAAA
AGGAACTATCTTTGAAGTTCGTTTTAACCGACATAATTTTGGTAAATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(218-284)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(328-435)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A091BVP1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.54

98.416

0.586
  ciaH Streptococcus pneumoniae Rx1

52.174

98.869

0.516
  ciaH Streptococcus pneumoniae D39

52.174

98.869

0.516
  ciaH Streptococcus pneumoniae R6

52.174

98.869

0.516
  ciaH Streptococcus pneumoniae TIGR4

52.174

98.869

0.516