Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   P7Y79_RS03365 Genome accession   NZ_CP121207
Coordinates   700326..701396 (+) Length   356 a.a.
NCBI ID   WP_039696676.1    Uniprot ID   A0A091BTF1
Organism   Streptococcus ruminicola strain CNU_77-47     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 695326..706396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7Y79_RS03350 (P7Y79_03350) amiA 695848..697821 (+) 1974 WP_039696673.1 peptide ABC transporter substrate-binding protein Regulator
  P7Y79_RS03355 (P7Y79_03355) amiC 697889..699391 (+) 1503 WP_074799225.1 ABC transporter permease Regulator
  P7Y79_RS03360 (P7Y79_03360) amiD 699391..700317 (+) 927 WP_158914123.1 oligopeptide ABC transporter permease OppC Regulator
  P7Y79_RS03365 (P7Y79_03365) amiE 700326..701396 (+) 1071 WP_039696676.1 ABC transporter ATP-binding protein Regulator
  P7Y79_RS03370 (P7Y79_03370) amiF 701389..702315 (+) 927 WP_278007731.1 ATP-binding cassette domain-containing protein Regulator
  P7Y79_RS03375 (P7Y79_03375) - 702482..703636 (+) 1155 WP_074560552.1 DUF1972 domain-containing protein -
  P7Y79_RS03380 (P7Y79_03380) - 703626..704558 (+) 933 WP_158914121.1 glycosyltransferase family 2 protein -
  P7Y79_RS03385 (P7Y79_03385) - 704559..705365 (+) 807 WP_158914119.1 ABC transporter permease -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 39789.01 Da        Isoelectric Point: 7.1729

>NTDB_id=811094 P7Y79_RS03365 WP_039696676.1 700326..701396(+) (amiE) [Streptococcus ruminicola strain CNU_77-47]
MVSENVIISVNNLVVKFKVRNRLLTAIRNISLDLYKGEVLAIVGESGSGKSVLTKTFTGMLESNGFISNGSILYRGQELT
NLKSNKDWESIRGSKIATIFQDPMTSLDPIKTIGSQIVDVIVKHQQLSKTEAKAMALNYMKEVGISDVERRFDEYPFQYS
GGMRQRIVIAIALACKPDVLICDEPTTALDVTIQAQILALLKRLQKEYQFTTIFITHDLGVVASIADKVAVMYAGQIIEY
ATVEELFYDPKHPYTWSLLSSLPQLADEKSGLLFSIPGAPPSLYASIQGDAFAPRSHFAMKIDFTEEPPIFNVSKTHWAK
TWLLHPDAPKVDKPEIIQDLHHKISQKMLSKERENA

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=811094 P7Y79_RS03365 WP_039696676.1 700326..701396(+) (amiE) [Streptococcus ruminicola strain CNU_77-47]
ATGGTTAGTGAAAATGTAATAATTAGCGTGAATAACTTAGTTGTAAAATTTAAGGTTCGTAATCGTCTTTTGACAGCTAT
CCGAAATATTTCGCTGGATCTTTATAAAGGAGAAGTTCTTGCAATTGTTGGGGAGTCTGGAAGCGGGAAATCTGTTCTAA
CCAAAACTTTTACAGGGATGCTAGAAAGTAATGGTTTTATTTCAAATGGTTCTATTTTATATCGCGGACAAGAGTTAACT
AATTTAAAATCAAATAAAGATTGGGAGTCAATTCGTGGAAGTAAGATTGCTACTATTTTTCAAGATCCAATGACTTCTCT
TGACCCCATAAAAACGATTGGCAGTCAGATTGTTGATGTTATTGTTAAGCATCAACAGCTTTCAAAAACGGAAGCTAAAG
CAATGGCTCTAAACTATATGAAAGAAGTTGGAATTTCTGATGTAGAACGCAGATTTGATGAATATCCTTTTCAATATTCA
GGTGGTATGCGACAACGTATTGTTATCGCTATTGCGCTTGCTTGTAAGCCGGATGTCTTGATTTGTGATGAACCAACGAC
AGCACTTGATGTTACCATCCAAGCACAGATCCTTGCGTTATTAAAAAGATTGCAAAAAGAATATCAATTTACAACTATTT
TTATCACGCACGACTTAGGTGTCGTAGCTAGTATCGCTGATAAAGTTGCTGTCATGTATGCAGGACAAATTATTGAGTAT
GCAACAGTTGAAGAACTCTTTTATGATCCAAAGCATCCGTATACATGGAGTTTATTATCTAGTCTTCCTCAATTAGCTGA
TGAAAAAAGTGGCTTGCTTTTTTCAATTCCTGGTGCCCCTCCCTCTCTTTATGCGTCAATTCAAGGTGATGCATTTGCTC
CGCGATCACATTTTGCAATGAAAATTGATTTTACGGAAGAACCACCGATTTTTAATGTATCAAAAACGCATTGGGCTAAA
ACTTGGTTACTTCATCCAGATGCTCCAAAAGTTGATAAACCGGAGATTATCCAAGATTTACATCATAAGATTTCGCAAAA
AATGTTGAGTAAGGAGAGAGAAAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A091BTF1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

76.012

97.191

0.739

  amiE Streptococcus thermophilus LMG 18311

74.277

97.191

0.722

  amiE Streptococcus thermophilus LMD-9

74.277

97.191

0.722

  oppD Streptococcus mutans UA159

55.367

99.438

0.551