Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   P7Y79_RS02465 Genome accession   NZ_CP121207
Coordinates   509943..511295 (+) Length   450 a.a.
NCBI ID   WP_039696510.1    Uniprot ID   A0AAE6UZR7
Organism   Streptococcus ruminicola strain CNU_77-47     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 504943..516295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7Y79_RS02435 (P7Y79_02435) - 505312..505920 (+) 609 WP_006532767.1 TVP38/TMEM64 family protein -
  P7Y79_RS02440 (P7Y79_02440) - 505958..506605 (-) 648 WP_006532766.1 amino acid ABC transporter permease -
  P7Y79_RS02445 (P7Y79_02445) - 506618..507325 (-) 708 WP_039696506.1 amino acid ABC transporter permease -
  P7Y79_RS02450 (P7Y79_02450) - 507341..508153 (-) 813 WP_157629242.1 transporter substrate-binding domain-containing protein -
  P7Y79_RS02455 (P7Y79_02455) - 508164..508928 (-) 765 WP_278007664.1 amino acid ABC transporter ATP-binding protein -
  P7Y79_RS02460 (P7Y79_02460) vicR 509240..509950 (+) 711 WP_039696509.1 response regulator YycF Regulator
  P7Y79_RS02465 (P7Y79_02465) vicK 509943..511295 (+) 1353 WP_039696510.1 cell wall metabolism sensor histidine kinase VicK Regulator
  P7Y79_RS02470 (P7Y79_02470) vicX 511296..512105 (+) 810 WP_278007665.1 MBL fold metallo-hydrolase Regulator
  P7Y79_RS02475 (P7Y79_02475) rnc 512327..513013 (+) 687 WP_020917219.1 ribonuclease III -

Sequence

Protein


Download         Length: 450 a.a.        Molecular weight: 51378.34 Da        Isoelectric Point: 4.7359

>NTDB_id=811087 P7Y79_RS02465 WP_039696510.1 509943..511295(+) (vicK) [Streptococcus ruminicola strain CNU_77-47]
MNDTMVQNQYLFEQAILFLLAFVAIYFIHLAIRDYRTSVNIRRLSGKVRELITGKYTEDIIIEKDRDLAELAGQLNDLST
VFRLAQENLAQEKNRLASILSYMTDGVLATDRSGNITMINQTAQKQLNLEREEALGMNIVDILGDDSDYSYHDLVSKTPE
IVLNRRDETGEFITLRIRFALNRRDSGFISGLIAVLHDTTEQEKEDRERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMIRMISDLLNLSRIDNQTVQLEVEMTNFTAFMTSILNRFDQIKSQHTVAGKQYEIVRDYPIKS
IWVEIDPDKMTQVLDNILNNAIKYSPDGGKITVSMKTTETQLIISISDEGLGIPKKDLPLIFDRFYRVDKARSRAQGGSG
LGLAIAKEIVKQHKGFIWAQSTYGKGSTFTIVLPYEKDSDIYDEWEDDED

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=811087 P7Y79_RS02465 WP_039696510.1 509943..511295(+) (vicK) [Streptococcus ruminicola strain CNU_77-47]
ATGAATGATACAATGGTACAGAATCAATATCTGTTTGAACAAGCCATTCTTTTCTTGTTAGCTTTTGTAGCCATTTATTT
TATTCATTTGGCTATCAGAGACTATAGAACGTCTGTTAATATTCGTCGATTGAGTGGTAAGGTTCGTGAACTGATTACAG
GAAAATACACAGAAGATATTATCATTGAAAAAGACAGAGATTTAGCAGAGCTGGCTGGTCAGTTAAATGATTTGTCAACT
GTCTTTCGTCTGGCTCAAGAAAATCTAGCCCAAGAAAAGAATCGTTTAGCAAGTATTTTGTCTTACATGACTGATGGGGT
GCTAGCGACTGACCGTTCTGGAAATATCACCATGATTAACCAGACCGCTCAAAAGCAACTAAATCTTGAGCGTGAAGAAG
CTCTTGGGATGAATATCGTTGACATTCTTGGTGATGATAGCGATTATTCTTACCATGATTTGGTGTCTAAGACGCCAGAA
ATTGTGCTTAATCGTCGCGATGAGACGGGAGAATTTATCACTTTGCGCATTCGTTTCGCCTTAAATCGTAGAGATAGTGG
TTTTATTTCTGGGCTGATTGCTGTCTTGCATGATACGACAGAGCAAGAAAAAGAAGACCGTGAACGTCGCTTGTTCGTTT
CTAATGTTAGTCATGAATTGCGTACGCCACTGACTTCGGTTAAATCTTATCTTGAGGCACTGGATGAAGGGGCTCTGAAA
GAAGATATTGCACCAAGTTTCATTAAAGTTTCTTTGGATGAAACCAATCGTATGATTCGCATGATTTCTGATTTGCTTAA
CTTATCTCGTATTGATAATCAGACAGTGCAATTAGAAGTTGAAATGACGAACTTCACAGCCTTTATGACGTCTATTTTGA
ATCGTTTTGACCAGATTAAGAGCCAACACACGGTTGCTGGCAAGCAATACGAAATTGTCAGAGACTATCCGATCAAGTCA
ATCTGGGTTGAAATTGACCCAGATAAGATGACACAGGTCTTGGATAATATCCTAAATAATGCCATTAAGTATTCACCAGA
CGGTGGTAAAATTACTGTTAGCATGAAGACAACTGAAACTCAGTTGATTATTTCGATTTCTGATGAAGGACTTGGTATTC
CGAAGAAAGACTTGCCGTTAATCTTTGACCGTTTCTACCGTGTTGATAAGGCTAGAAGTCGTGCCCAAGGTGGTTCAGGG
CTTGGACTTGCCATTGCTAAAGAAATTGTCAAACAACATAAAGGATTTATTTGGGCTCAAAGTACCTATGGTAAGGGCTC
AACATTTACAATTGTTCTTCCGTATGAGAAGGATTCTGATATTTATGATGAATGGGAGGATGACGAGGACTAG

Domains

Predicted by InterproScan.

PAS fold (PAS)

(95-189)

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(326-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

76.867

92.222

0.709
  micB Streptococcus pneumoniae Cp1015

64.237

97.556

0.627