Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | HT081_RS10955 | Genome accession | NZ_AP023073 |
| Coordinates | 2097381..2097800 (-) | Length | 139 a.a. |
| NCBI ID | WP_172760461.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain TUM15753 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2092381..2102800
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT081_RS10920 (TUM15753C_20930) | pilA | 2093178..2094431 (+) | 1254 | WP_003696286.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| HT081_RS10925 | - | 2094545..2094682 (-) | 138 | WP_172760541.1 | hypothetical protein | - |
| HT081_RS10930 (TUM15753C_20940) | - | 2094696..2095490 (-) | 795 | Protein_2119 | opacity family porin | - |
| HT081_RS10935 | - | 2095417..2095572 (+) | 156 | WP_172763131.1 | hypothetical protein | - |
| HT081_RS10940 (TUM15753C_20950) | pilE | 2096084..2096566 (-) | 483 | WP_172762861.1 | pilin | Machinery gene |
| HT081_RS10945 | - | 2096935..2097078 (-) | 144 | WP_172763123.1 | hypothetical protein | - |
| HT081_RS10950 | - | 2097183..2097263 (-) | 81 | Protein_2123 | pilin | - |
| HT081_RS10955 (TUM15753C_20960) | pilE | 2097381..2097800 (-) | 420 | WP_172760461.1 | pilin | Machinery gene |
| HT081_RS10960 (TUM15753C_20970) | lpxC | 2097920..2098843 (-) | 924 | WP_172760462.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| HT081_RS12285 (TUM15753C_20980) | - | 2099345..2100061 (-) | 717 | WP_366557442.1 | pilin | - |
| HT081_RS10980 (TUM15753C_20990) | pilE | 2099985..2100302 (-) | 318 | WP_003697861.1 | pilin | Machinery gene |
| HT081_RS10985 | - | 2100675..2100806 (-) | 132 | WP_010356054.1 | hypothetical protein | - |
| HT081_RS10990 (TUM15753C_21000) | - | 2100891..2101580 (-) | 690 | WP_172760388.1 | M48 family metallopeptidase | - |
| HT081_RS10995 (TUM15753C_21010) | - | 2101577..2102320 (-) | 744 | WP_172760387.1 | lysophospholipid acyltransferase family protein | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15056.83 Da Isoelectric Point: 9.7771
>NTDB_id=81105 HT081_RS10955 WP_172760461.1 2097381..2097800(-) (pilE) [Neisseria gonorrhoeae strain TUM15753]
MPTDPDSRLRGNDEAILLAEGQKSAVTEYYLNHGIWPKDNTSAGVASPASNIKGKYVQKVEVNNGVVTAQMKPSGVNNEI
KGKRLSLWGRRENGSVKWFCGQPVTRTAGTDDVAKAGNDNEKINTKHLPSTCRDKSTAT
MPTDPDSRLRGNDEAILLAEGQKSAVTEYYLNHGIWPKDNTSAGVASPASNIKGKYVQKVEVNNGVVTAQMKPSGVNNEI
KGKRLSLWGRRENGSVKWFCGQPVTRTAGTDDVAKAGNDNEKINTKHLPSTCRDKSTAT
Nucleotide
Download Length: 420 bp
>NTDB_id=81105 HT081_RS10955 WP_172760461.1 2097381..2097800(-) (pilE) [Neisseria gonorrhoeae strain TUM15753]
GTGCCGACAGACCCGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCGTCAC
CGAGTATTACCTGAATCACGGCATATGGCCGAAAGACAACACTTCTGCCGGCGTGGCATCCCCCGCCTCCAACATCAAAG
GCAAATATGTTCAGAAAGTTGAAGTCAACAACGGCGTCGTTACCGCCCAAATGAAACCAAGCGGCGTAAACAATGAAATC
AAAGGCAAAAGACTATCCCTGTGGGGCAGGCGTGAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCAC
CGCCGGCACCGACGACGTCGCCAAAGCCGGCAACGACAACGAAAAAATCAACACCAAGCACCTGCCGTCAACCTGCCGCG
ATAAATCAACTGCCACCTAA
GTGCCGACAGACCCGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCGTCAC
CGAGTATTACCTGAATCACGGCATATGGCCGAAAGACAACACTTCTGCCGGCGTGGCATCCCCCGCCTCCAACATCAAAG
GCAAATATGTTCAGAAAGTTGAAGTCAACAACGGCGTCGTTACCGCCCAAATGAAACCAAGCGGCGTAAACAATGAAATC
AAAGGCAAAAGACTATCCCTGTGGGGCAGGCGTGAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCAC
CGCCGGCACCGACGACGTCGCCAAAGCCGGCAACGACAACGAAAAAATCAACACCAAGCACCTGCCGTCAACCTGCCGCG
ATAAATCAACTGCCACCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
70.714 |
100 |
0.712 |
| pilE | Neisseria gonorrhoeae MS11 |
71.014 |
99.281 |
0.705 |