Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   P7F70_RS07205 Genome accession   NZ_CP121201
Coordinates   1436541..1438772 (-) Length   743 a.a.
NCBI ID   WP_278023897.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP28     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1431541..1443772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS07185 (P7F70_07190) - 1431930..1433021 (-) 1092 WP_278023890.1 sensor histidine kinase -
  P7F70_RS07190 (P7F70_07195) - 1433021..1433752 (-) 732 WP_278023892.1 ABC transporter permease -
  P7F70_RS07195 (P7F70_07200) - 1433736..1434632 (-) 897 WP_278023894.1 ABC transporter ATP-binding protein -
  P7F70_RS07200 (P7F70_07205) - 1434883..1436418 (-) 1536 WP_278023896.1 acyl-CoA synthetase -
  P7F70_RS07205 (P7F70_07210) comEC/celB 1436541..1438772 (-) 2232 WP_278023897.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  P7F70_RS07210 (P7F70_07215) - 1438765..1439436 (-) 672 WP_278023899.1 helix-hairpin-helix domain-containing protein -
  P7F70_RS07215 (P7F70_07220) - 1439506..1440255 (-) 750 WP_278023900.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  P7F70_RS07220 (P7F70_07225) - 1440414..1440602 (+) 189 WP_160544380.1 hypothetical protein -
  P7F70_RS07225 (P7F70_07230) - 1440959..1441492 (-) 534 WP_278023903.1 isoprenylcysteine carboxyl methyltransferase family protein -
  P7F70_RS07230 (P7F70_07235) - 1441749..1442507 (+) 759 WP_104968268.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  P7F70_RS07235 (P7F70_07240) - 1442504..1442764 (+) 261 WP_104968269.1 GIY-YIG nuclease family protein -

Sequence


Protein


Download         Length: 743 a.a.        Molecular weight: 84136.94 Da        Isoelectric Point: 9.5421

>NTDB_id=811006 P7F70_RS07205 WP_278023897.1 1436541..1438772(-) (comEC/celB) [Streptococcus pluranimalium strain SP28]
MIKPVMLKPIYLAFLVALTYFMILTKSWVVILLALLAVIALFRQYSKKAIIQTIVILTLFVAYFTFLGNKQIQLEKQLPS
QVSTLRVIPDSISVDGDLLSARAEEGKQRYQLYYQLQTESEKEYFQNLNQLILLKVVASVEKPQGQRNFKGFDYKTYLKR
EGIYGIVQVEKVNAIHTVAPQNLEEWVRLWRRKLLIHINQHFPEPMKHYMTGLLLGYLDKSFDEMSDIYTDLGIIHLFAL
SGMQVGFFVGIFRTILLRLGLLREHFLYVLLPFSFIYAGLTGFTISVVRSLLQAILSQFGLRKWDNLGTTILILFLLSPH
FLITTGGVLSFAYAFILSTLDLDTLSGSRKAVVESMVLSLGILPLLVFYFGTFQPLSILLTAFFSVIFDVFLLPLLSLVL
LASPIVSLDFFNPCFYFLESVIKWTVHLSPRPLVFGSPNLTVLLLMLISLAVVHDFWHDKKLRYCFLVAVVALFAVTKNP
LENEVTVLDVGQGDSIFIRDIRGKTLLIDTGGRVDFTQKEEWRRRQKTANAERTSIPYLKSQGISSIDQLVITHTDADHM
GDMAVLAKQFSIKEVLVSPGALTNPSFVKVLKSLKIKVGLLQAGDQIAIMGSSLQVLYPWDQGDGGNNDSLVLYGKLLNK
RFLFTGDLEVDGEKSLMMRYPNLPVDILKAGHHGSKGSSDPDFLKHIGAKVVLISAGLNNRYQHPNDETLERFEAEKMMV
YRTDQEGAIRYRGIKSWKVETVR

Nucleotide


Download         Length: 2232 bp        

>NTDB_id=811006 P7F70_RS07205 WP_278023897.1 1436541..1438772(-) (comEC/celB) [Streptococcus pluranimalium strain SP28]
TTGATTAAACCAGTGATGTTAAAGCCAATTTACTTGGCTTTTTTAGTAGCTTTGACCTATTTTATGATCTTGACCAAATC
CTGGGTTGTCATTTTGCTAGCTTTGCTTGCCGTTATCGCTTTATTCAGACAATATTCTAAAAAGGCAATTATACAGACGA
TTGTTATCCTTACTCTATTTGTTGCGTATTTTACTTTTTTGGGGAACAAGCAGATTCAGCTGGAAAAGCAGCTCCCAAGT
CAAGTGTCAACATTACGTGTAATACCTGACAGCATTTCTGTAGATGGTGATTTATTATCTGCGCGTGCTGAAGAAGGTAA
GCAAAGGTATCAGCTTTATTATCAATTACAGACGGAATCGGAAAAGGAATATTTTCAAAATCTTAATCAGCTGATCCTTT
TAAAGGTAGTGGCTTCAGTCGAGAAGCCGCAAGGTCAGCGCAATTTTAAAGGTTTTGATTATAAGACTTATTTGAAACGA
GAAGGCATTTATGGCATCGTTCAAGTCGAGAAAGTTAACGCCATTCATACGGTTGCTCCTCAAAACCTAGAGGAATGGGT
TAGACTGTGGCGACGAAAACTTTTGATCCACATCAATCAACACTTTCCTGAGCCAATGAAACACTATATGACGGGACTTT
TGTTGGGTTATTTGGATAAGTCTTTTGACGAGATGAGTGATATCTATACGGATTTGGGGATTATTCATCTTTTTGCCCTG
TCTGGCATGCAGGTGGGCTTTTTTGTCGGTATTTTTCGGACGATCCTTTTACGTCTAGGGCTTTTGAGGGAGCATTTTTT
GTATGTTCTTCTGCCATTTTCCTTTATTTACGCCGGCCTAACAGGATTCACGATTTCTGTGGTACGAAGCTTATTACAGG
CCATTCTCAGTCAATTTGGCTTGCGAAAATGGGATAATTTAGGAACAACCATCTTGATATTGTTCCTGCTATCGCCCCAT
TTTCTGATTACAACAGGAGGTGTTTTATCTTTTGCTTATGCCTTCATACTGTCTACCTTAGATTTAGACACTTTGTCAGG
AAGCCGCAAAGCAGTAGTAGAAAGTATGGTACTTTCACTAGGTATTCTACCCTTGTTGGTATTTTATTTCGGGACTTTTC
AGCCTCTGTCAATTCTTTTAACAGCATTCTTTTCAGTGATTTTTGATGTCTTTTTGTTACCCTTGTTAAGTCTTGTGTTA
TTAGCCAGTCCGATAGTATCTCTAGACTTTTTTAATCCTTGCTTTTACTTTTTAGAATCAGTTATCAAGTGGACGGTACA
TTTGTCTCCTCGCCCCTTGGTTTTTGGTAGCCCTAACTTAACTGTACTTCTATTAATGCTTATTTCTTTAGCTGTTGTAC
ATGATTTTTGGCATGATAAAAAATTGAGGTACTGTTTTTTGGTTGCTGTAGTTGCCTTGTTTGCTGTGACGAAAAACCCT
TTAGAAAATGAGGTGACTGTTCTAGATGTTGGGCAAGGAGATTCGATTTTCATTAGGGATATCAGAGGGAAAACCTTGCT
TATTGATACGGGAGGCCGAGTTGATTTTACTCAGAAAGAGGAGTGGCGCAGGCGGCAGAAAACAGCTAATGCTGAACGGA
CATCCATCCCTTATCTGAAAAGTCAAGGGATTTCGTCCATCGATCAACTTGTGATTACGCATACCGATGCAGATCACATG
GGAGATATGGCAGTTCTAGCCAAGCAGTTTAGTATTAAGGAAGTTTTGGTTAGTCCAGGCGCTCTGACCAATCCTTCTTT
TGTAAAAGTGCTAAAATCATTGAAAATCAAAGTAGGCTTGCTTCAAGCTGGGGATCAGATTGCGATTATGGGGTCTTCTC
TTCAAGTTCTCTACCCGTGGGATCAGGGAGATGGTGGGAATAACGATTCCTTGGTCTTATATGGAAAGTTATTAAATAAA
CGATTTCTTTTTACGGGAGATTTAGAAGTTGATGGTGAAAAATCCTTGATGATGAGGTATCCCAACTTACCCGTTGATAT
TTTAAAAGCTGGGCACCATGGCTCTAAAGGATCCTCTGATCCAGATTTTTTAAAACATATTGGAGCAAAAGTCGTTTTGA
TTTCAGCTGGTCTTAATAATCGTTACCAGCATCCCAATGATGAAACCTTAGAGCGCTTTGAAGCAGAAAAGATGATGGTT
TATAGGACCGATCAAGAAGGGGCGATTCGTTACAGAGGCATAAAGAGTTGGAAAGTTGAAACGGTTCGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis NCTC 12261

48.322

100

0.485

  comEC/celB Streptococcus mitis SK321

48.645

99.327

0.483

  comEC/celB Streptococcus pneumoniae TIGR4

46.917

100

0.471

  comEC/celB Streptococcus pneumoniae D39

46.783

100

0.47

  comEC/celB Streptococcus pneumoniae Rx1

46.783

100

0.47

  comEC/celB Streptococcus pneumoniae R6

46.783

100

0.47

  comEC Lactococcus lactis subsp. cremoris KW2

44.011

100

0.44