Detailed information NTG0809691

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: QN325_RS00935
• Genome accession: NZ_CP135101
• Coordinates: 171019..171480 (-)
• Length: 153 a.a.
• NCBI ID: WP_001878820.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain HU13/21
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 166019..176480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN325_RS00900 (QN325_00900)	-	166572..167237 (-)	666	WP_000008113.1	CPBP family intramembrane glutamic endopeptidase	-
QN325_RS00905 (QN325_00905)	-	167306..167761 (-)	456	WP_000905673.1	hypothetical protein	-
QN325_RS00910 (QN325_00910)	-	167802..167939 (-)	138	WP_001865900.1	hypothetical protein	-
QN325_RS00915 (QN325_00915)	-	167998..168204 (-)	207	WP_000798241.1	helix-turn-helix transcriptional regulator	-
QN325_RS00920 (QN325_00920)	-	168356..169549 (-)	1194	WP_000047534.1	acetate kinase	-
QN325_RS00925 (QN325_00925)	comGH	169581..170555 (-)	975	WP_001008574.1	class I SAM-dependent methyltransferase	Machinery gene
QN325_RS00930 (QN325_00930)	comGG	170670..171041 (-)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
QN325_RS00935 (QN325_00935)	comGF	171019..171480 (-)	462	WP_001878820.1	competence type IV pilus minor pilin ComGF	Machinery gene
QN325_RS00940 (QN325_00940)	comGE	171434..171733 (-)	300	WP_000234804.1	competence type IV pilus minor pilin ComGE	Machinery gene
QN325_RS00945 (QN325_00945)	comGD	171705..172118 (-)	414	WP_000244261.1	competence type IV pilus minor pilin ComGD	Machinery gene
QN325_RS00950 (QN325_00950)	comGC/cglC	172093..172422 (-)	330	WP_000793380.1	competence type IV pilus major pilin ComGC	Machinery gene
QN325_RS00955 (QN325_00955)	comGB	172419..173462 (-)	1044	WP_223295889.1	competence type IV pilus assembly protein ComGB	Machinery gene
QN325_RS00960 (QN325_00960)	comGA	173356..174327 (-)	972	WP_000250805.1	competence type IV pilus ATPase ComGA	Machinery gene
QN325_RS00965 (QN325_00965)	-	174500..174865 (-)	366	WP_000285373.1	DUF1033 family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17874.95 Da
• Isoelectric Point: 10.0299

>NTDB_id=809691 QN325_RS00935 WP_001878820.1 171019..171480(-) (comGF) [Streptococcus agalactiae strain HU13/21]
MKIIRKFCTYQKLRVKAFTLLKCLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=809691 QN325_RS00935 WP_001878820.1 171019..171480(-) (comGF) [Streptococcus agalactiae strain HU13/21]
TTGAAGATAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACGCTTTTAAAATGTTTGGTAGCATT
GGTTACAATCACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTTGAAGGCGCTCATCTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAGACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.183	92.81	0.438
comGF	Streptococcus mutans UA140	47.183	92.81	0.438
comGF/cglF	Streptococcus pneumoniae Rx1	42.446	90.85	0.386
comGF/cglF	Streptococcus pneumoniae D39	42.446	90.85	0.386
comGF/cglF	Streptococcus pneumoniae R6	42.446	90.85	0.386
comGF/cglF	Streptococcus pneumoniae TIGR4	42.446	90.85	0.386
comGF/cglF	Streptococcus mitis SK321	43.284	87.582	0.379
comGF/cglF	Streptococcus mitis NCTC 12261	42.537	87.582	0.373
comGF	Lactococcus lactis subsp. cremoris KW2	40	91.503	0.366