Detailed information NTG0809389

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LLNCDO1820_RS09125
• Genome accession: NZ_CP120927
• Coordinates: 1788264..1789253 (-)
• Length: 329 a.a.
• NCBI ID: WP_010906110.1
• Uniprot ID: A0AAC9W770
• Organism: Lactococcus lactis subsp. lactis strain NCDO1820
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1783264..1794253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLNCDO1820_RS09110 (LLNCDO1820_09100)	-	1784630..1785556 (-)	927	WP_010906107.1	peptidyl-prolyl cis-trans isomerase	-
LLNCDO1820_RS09115 (LLNCDO1820_09105)	-	1785710..1786393 (-)	684	WP_010906108.1	O-methyltransferase	-
LLNCDO1820_RS09120 (LLNCDO1820_09110)	pepF	1786396..1788201 (-)	1806	WP_010906109.1	oligoendopeptidase F	Regulator
LLNCDO1820_RS09125 (LLNCDO1820_09115)	coiA	1788264..1789253 (-)	990	WP_010906110.1	competence protein CoiA	Machinery gene
LLNCDO1820_RS09130 (LLNCDO1820_09120)	-	1789327..1790412 (-)	1086	WP_003130405.1	YdcF family protein	-
LLNCDO1820_RS09135 (LLNCDO1820_09125)	-	1790574..1791422 (-)	849	WP_010906111.1	alpha/beta hydrolase	-
LLNCDO1820_RS09140 (LLNCDO1820_09130)	-	1791614..1793035 (-)	1422	WP_003130403.1	NCS2 family permease	-
LLNCDO1820_RS09145 (LLNCDO1820_09135)	-	1793342..1794178 (+)	837	WP_003130402.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 39426.97 Da
• Isoelectric Point: 8.0231

>NTDB_id=809389 LLNCDO1820_RS09125 WP_010906110.1 1788264..1789253(-) (coiA) [Lactococcus lactis subsp. lactis strain NCDO1820]
MLTAIDENGQVVNLLEIEVKELTGKYFCPSCKSELFIKNGEIKMPHFAHKSLKACDLWLENESEQHLGLKKALYQWFKKT
DKVEIEAYIPEFKQRPDLLVNDTIAIEIQCSHLSMKRLKERTENYQVHGFTVLWLMGQDLWLKDQITELQKNLVYFSENR
GFYYWELDFKAQKMRLKSLIHEDLRGKIIYLQEEIPFGEGRLIEQLRLPFLSQKLLTIPLIVDLKLAEFIRRQLYYCSPK
WLKLQEKYYQRGENLLNLTFERSFIAPLGLNLLEVFDDEIPLHKFTQIKQNINLYYENFLINFQQNSFKAVYPPRFYVIM
KKQKKDMNE

Nucleotide

• Length: 990 bp

>NTDB_id=809389 LLNCDO1820_RS09125 WP_010906110.1 1788264..1789253(-) (coiA) [Lactococcus lactis subsp. lactis strain NCDO1820]
ATGTTGACAGCAATTGATGAAAATGGACAAGTAGTAAACTTATTAGAAATAGAAGTAAAAGAACTGACAGGAAAATATTT
TTGTCCTTCTTGTAAATCAGAGTTATTTATAAAAAATGGTGAAATAAAGATGCCTCACTTTGCTCATAAATCTCTCAAAG
CTTGCGACTTATGGCTTGAAAACGAATCTGAACAACATTTAGGATTAAAAAAAGCACTCTATCAATGGTTTAAAAAAACT
GATAAGGTGGAAATTGAAGCTTATATTCCTGAATTTAAGCAGAGGCCAGATTTATTGGTAAATGATACAATAGCTATTGA
AATTCAATGTTCTCATCTTTCTATGAAACGTTTAAAAGAAAGGACAGAGAATTATCAAGTCCACGGTTTTACGGTACTTT
GGCTTATGGGGCAAGATTTATGGTTAAAAGACCAAATAACAGAACTTCAAAAAAATCTAGTCTATTTTTCAGAAAATAGA
GGTTTCTATTATTGGGAGTTAGATTTCAAAGCTCAGAAGATGAGATTAAAATCCCTGATTCATGAAGATTTGCGTGGAAA
AATTATTTATTTACAAGAAGAAATTCCTTTTGGGGAAGGACGACTTATTGAGCAATTACGACTGCCTTTTTTATCACAAA
AGTTACTGACAATACCACTTATTGTTGATCTTAAACTAGCGGAATTTATTCGTCGGCAACTTTATTATTGTTCACCAAAA
TGGTTGAAACTTCAGGAAAAATATTACCAAAGAGGTGAAAATTTGTTGAATTTGACTTTTGAACGTTCTTTTATTGCGCC
TTTGGGGTTGAACTTACTTGAAGTTTTTGATGATGAAATCCCTTTACATAAATTTACTCAAATTAAGCAGAATATTAATC
TCTATTATGAAAACTTTTTAATAAATTTTCAGCAAAATAGCTTTAAGGCAGTCTATCCTCCCCGTTTCTATGTTATAATG
AAAAAGCAGAAGAAGGATATGAATGAATGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	74.847	99.088	0.742
coiA	Streptococcus mitis NCTC 12261	43.789	97.872	0.429
coiA	Streptococcus pneumoniae TIGR4	43.478	97.872	0.426
coiA	Streptococcus pneumoniae Rx1	43.478	97.872	0.426
coiA	Streptococcus pneumoniae D39	43.478	97.872	0.426
coiA	Streptococcus pneumoniae R6	43.478	97.872	0.426