Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | P5655_RS19530 | Genome accession | NZ_CP120681 |
| Coordinates | 3625224..3625514 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain DSM 10 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3620224..3630514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5655_RS19490 (P5655_19490) | darA | 3620247..3620576 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| P5655_RS19495 (P5655_19495) | yaaR | 3620589..3621029 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| P5655_RS19500 (P5655_19500) | holB | 3621041..3622030 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| P5655_RS19505 (P5655_19505) | ricT | 3622033..3622860 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| P5655_RS19510 (P5655_19510) | yabA | 3622875..3623234 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| P5655_RS19515 (P5655_19515) | trmNF | 3623293..3624036 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| P5655_RS19520 (P5655_19520) | yazA | 3624023..3624322 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| P5655_RS19525 (P5655_19525) | rsmI | 3624297..3625175 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| P5655_RS19530 (P5655_19530) | abrB | 3625224..3625514 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| P5655_RS19535 (P5655_19535) | metG | 3626009..3628003 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| P5655_RS19540 (P5655_19540) | dayD | 3628082..3628849 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| P5655_RS19545 (P5655_19545) | yabE | 3629005..3630318 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=807778 P5655_RS19530 WP_003226760.1 3625224..3625514(-) (abrB) [Bacillus subtilis strain DSM 10]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=807778 P5655_RS19530 WP_003226760.1 3625224..3625514(-) (abrB) [Bacillus subtilis strain DSM 10]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |