Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   P3R60_RS09095 Genome accession   NZ_CP120510
Coordinates   1757979..1759325 (+) Length   448 a.a.
NCBI ID   WP_104968254.1    Uniprot ID   A0A2L0D530
Organism   Streptococcus pluranimalium strain SP21-2     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1752979..1764325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS09065 - 1753358..1753957 (+) 600 WP_316606260.1 response regulator transcription factor -
  P3R60_RS09070 - 1754043..1754693 (-) 651 WP_104968259.1 amino acid ABC transporter permease -
  P3R60_RS09075 - 1754702..1755397 (-) 696 WP_316606261.1 amino acid ABC transporter permease -
  P3R60_RS09080 - 1755416..1756243 (-) 828 WP_316606262.1 transporter substrate-binding domain-containing protein -
  P3R60_RS09085 - 1756254..1757039 (-) 786 WP_278023883.1 amino acid ABC transporter ATP-binding protein -
  P3R60_RS09090 vicR 1757279..1757986 (+) 708 WP_104968255.1 response regulator YycF Regulator
  P3R60_RS09095 vicK 1757979..1759325 (+) 1347 WP_104968254.1 cell wall metabolism sensor histidine kinase VicK Regulator
  P3R60_RS09100 vicX 1759327..1760136 (+) 810 WP_316606263.1 MBL fold metallo-hydrolase Regulator
  P3R60_RS09105 rnc 1760371..1761072 (+) 702 WP_104968252.1 ribonuclease III -

Sequence


Protein


Download         Length: 448 a.a.        Molecular weight: 51137.14 Da        Isoelectric Point: 4.7338

>NTDB_id=805878 P3R60_RS09095 WP_104968254.1 1757979..1759325(+) (vicK) [Streptococcus pluranimalium strain SP21-2]
MTDQFLFSFRDVIIAGLMSILVLIYVFLIIRDTLNSRRVQQLTEQVQALISGEYVVNQVTRGSAEVKDLAEHLNDLSEVF
RLTHENLGQEKNRLSSILSYMSDGVLATDRRGNIIMINDMARQQLNLSEEGDLAINIMTLLEDTSYTYHDLITKTPEVTL
HRVDEFGEFTVLRVNFALIKRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALKEAV
APGFIRVSLDETNRMMRMITDLLSLSRIDNNNSELEVELTNFTAFITYILNRFDRIKLQETHAGKSYDIKRNYDLTPVWI
EIDNDKMTQVFDNILNNAIKYSPDGGEIKVSMRTTDTQLIVSVSDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTGLGL
AITKEIVKQHNGFIWAKSDYGKGSTFTIVLPYEKNILEVDEEWEVTED

Nucleotide


Download         Length: 1347 bp        

>NTDB_id=805878 P3R60_RS09095 WP_104968254.1 1757979..1759325(+) (vicK) [Streptococcus pluranimalium strain SP21-2]
ATGACTGATCAATTTCTTTTTTCATTTCGAGATGTTATTATTGCAGGGCTAATGTCAATTTTAGTCCTGATTTATGTTTT
TTTAATTATTCGGGATACTTTAAATAGTCGACGTGTGCAACAATTGACGGAGCAAGTTCAAGCCTTGATTTCAGGTGAGT
ATGTGGTCAATCAGGTAACACGAGGAAGTGCTGAAGTTAAGGACTTAGCTGAACATTTGAACGATCTATCTGAGGTTTTT
CGTCTAACACATGAAAATTTAGGACAAGAAAAAAATCGTCTTTCAAGTATTTTATCCTATATGAGCGATGGGGTTTTAGC
AACAGACCGTCGTGGTAATATCATTATGATTAATGATATGGCAAGGCAACAGTTGAACTTATCAGAAGAAGGTGACCTTG
CCATCAATATTATGACTTTGCTAGAAGATACCTCGTATACTTATCATGATTTAATAACCAAAACACCCGAAGTAACGCTT
CACCGTGTCGATGAGTTTGGTGAATTTACGGTACTGAGGGTCAATTTTGCTCTTATCAAGAGAGAGAGTGGTTTTATATC
TGGTTTGGTAGCCGTTTTACACGATACAACAGAACAAGAAAAAGAGGAACGTGAACGTCGTCTCTTTGTTTCCAATGTTA
GTCATGAATTACGGACTCCTCTAACATCGGTAAAGTCGTATCTTGAAGCCTTGGATGAAGGGGCCCTTAAGGAAGCTGTT
GCCCCTGGGTTTATCCGTGTTTCCTTAGATGAAACAAACCGGATGATGCGGATGATTACAGACTTGCTATCCCTATCACG
TATTGATAATAATAATAGTGAATTAGAAGTTGAACTGACGAACTTTACAGCTTTTATCACCTATATCCTAAATCGTTTTG
ACCGCATCAAGTTACAGGAAACACATGCAGGAAAATCTTATGATATTAAGCGCAACTACGATCTGACTCCTGTTTGGATT
GAGATTGATAATGATAAGATGACCCAAGTTTTCGATAATATTTTAAACAATGCTATCAAGTATTCACCAGATGGTGGTGA
GATTAAGGTGAGCATGCGAACGACTGATACTCAATTAATTGTATCGGTATCTGATCAAGGATTGGGAATTCCTAAAAAAG
ACTTGCCTTTAATTTTTGACCGTTTCTACCGTGTTGATAAGGCAAGAAGCCGTGCCCAAGGAGGCACTGGACTTGGTCTA
GCAATTACCAAAGAAATTGTTAAACAACACAATGGCTTTATTTGGGCTAAAAGTGATTACGGTAAGGGATCAACGTTTAC
CATCGTTTTACCGTATGAAAAGAATATTTTAGAAGTAGACGAAGAATGGGAGGTAACTGAAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2L0D530

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

71.29

91.741

0.654

  micB Streptococcus pneumoniae Cp1015

64.896

96.652

0.627