Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P3R60_RS09100 Genome accession   NZ_CP120510
Coordinates   1759327..1760136 (+) Length   269 a.a.
NCBI ID   WP_316606263.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1754327..1765136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS09075 - 1754702..1755397 (-) 696 WP_316606261.1 amino acid ABC transporter permease -
  P3R60_RS09080 - 1755416..1756243 (-) 828 WP_316606262.1 transporter substrate-binding domain-containing protein -
  P3R60_RS09085 - 1756254..1757039 (-) 786 WP_278023883.1 amino acid ABC transporter ATP-binding protein -
  P3R60_RS09090 vicR 1757279..1757986 (+) 708 WP_104968255.1 response regulator YycF Regulator
  P3R60_RS09095 vicK 1757979..1759325 (+) 1347 WP_104968254.1 cell wall metabolism sensor histidine kinase VicK Regulator
  P3R60_RS09100 vicX 1759327..1760136 (+) 810 WP_316606263.1 MBL fold metallo-hydrolase Regulator
  P3R60_RS09105 rnc 1760371..1761072 (+) 702 WP_104968252.1 ribonuclease III -
  P3R60_RS09110 smc 1761074..1764619 (+) 3546 WP_278023880.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30205.34 Da        Isoelectric Point: 6.1222

>NTDB_id=805879 P3R60_RS09100 WP_316606263.1 1759327..1760136(+) (vicX) [Streptococcus pluranimalium strain SP21-2]
MADKGFKYSILASGSTGNAFYLETQKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGVLARKYNLD
LYANEKTWEVMDAKNMLGKIDHSQKHIFSREKMMTFGDIDIESFGVSHDAVDPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVANADGYLIESNHDIEILRAGSYPWKTKQRILSDFGHLSNEAGAQAMIDTLGNRTKKIYLGHLSKENNIKELAHMTMES
NLMQADLGVNHDFKVLDTSPDTATPLVDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=805879 P3R60_RS09100 WP_316606263.1 1759327..1760136(+) (vicX) [Streptococcus pluranimalium strain SP21-2]
GTGGCTGATAAAGGATTTAAATACAGTATTTTAGCTTCAGGGTCGACAGGTAATGCTTTTTATCTGGAGACACAAAAGAA
ACGTCTTTTGATTGATGCTGGATTGACTGGTAAGAAAATTACCAGTCTTTTAGCTGAAATTGATCGACGACCTGAGGATT
TAGATGCTATTTTGATTACACACGAGCATTCAGACCATATCAAAGGAGTTGGGGTTTTGGCTCGCAAGTACAATCTTGAC
TTGTATGCGAATGAAAAAACTTGGGAAGTTATGGATGCCAAAAATATGCTAGGTAAGATAGATCATTCACAGAAGCATAT
CTTTTCGCGCGAAAAAATGATGACTTTCGGAGATATTGATATCGAGTCTTTTGGCGTTAGTCATGATGCGGTAGATCCGC
AGTTTTATCGTTTTATGAAAGATGATAAAAGCTTTGTCATGTTAACTGACACGGGCTATGTTAGCGATCGTATGGCAGGG
ATTGTTGCCAATGCGGATGGTTATTTGATTGAATCTAACCATGATATTGAAATTCTCAGAGCGGGTTCCTATCCATGGAA
AACCAAGCAGAGGATTTTATCTGACTTTGGTCATTTGTCTAATGAGGCTGGTGCTCAGGCTATGATTGACACGCTTGGTA
ATCGGACTAAGAAGATTTATCTTGGGCATTTGAGTAAGGAAAACAATATCAAGGAGCTAGCTCATATGACCATGGAGTCA
AATCTGATGCAAGCTGACTTGGGTGTTAATCATGATTTCAAAGTATTGGATACCTCACCAGACACGGCGACGCCATTAGT
CGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

74.721

100

0.747