Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | P3T75_RS10965 | Genome accession | NZ_CP120467 |
| Coordinates | 2268015..2268500 (-) | Length | 161 a.a. |
| NCBI ID | WP_282461602.1 | Uniprot ID | - |
| Organism | Enterococcus montenegrensis strain CoE-012-22 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2248981..2290979 | 2268015..2268500 | within | 0 |
Gene organization within MGE regions
Location: 2248981..2290979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3T75_RS10830 (P3T75_10825) | - | 2248981..2250015 (-) | 1035 | WP_282461580.1 | methionine ABC transporter ATP-binding protein | - |
| P3T75_RS10835 (P3T75_10830) | - | 2250406..2250744 (-) | 339 | WP_282461581.1 | glycine cleavage system protein H | - |
| P3T75_RS10840 (P3T75_10835) | - | 2250746..2251102 (-) | 357 | WP_206902320.1 | arsenate reductase family protein | - |
| P3T75_RS10845 (P3T75_10840) | - | 2251147..2252340 (-) | 1194 | WP_282461582.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| P3T75_RS10850 (P3T75_10845) | - | 2252756..2252995 (-) | 240 | WP_173102292.1 | hypothetical protein | - |
| P3T75_RS10860 (P3T75_10855) | - | 2253658..2254872 (+) | 1215 | WP_282461583.1 | LysM peptidoglycan-binding domain-containing protein | - |
| P3T75_RS10865 (P3T75_10860) | - | 2254915..2255658 (-) | 744 | WP_282461584.1 | N-acetylmuramoyl-L-alanine amidase | - |
| P3T75_RS10870 (P3T75_10865) | - | 2255659..2255967 (-) | 309 | WP_282461585.1 | hypothetical protein | - |
| P3T75_RS10875 (P3T75_10870) | - | 2255960..2256364 (-) | 405 | WP_282462603.1 | holin family protein | - |
| P3T75_RS10880 (P3T75_10875) | - | 2256408..2256551 (-) | 144 | WP_282461586.1 | XkdX family protein | - |
| P3T75_RS10885 (P3T75_10880) | - | 2256553..2256900 (-) | 348 | WP_282461587.1 | hypothetical protein | - |
| P3T75_RS10890 (P3T75_10885) | - | 2256894..2257349 (-) | 456 | WP_282461588.1 | hypothetical protein | - |
| P3T75_RS10895 (P3T75_10890) | - | 2257351..2257636 (-) | 286 | Protein_2120 | hypothetical protein | - |
| P3T75_RS10900 (P3T75_10895) | - | 2257633..2258358 (-) | 726 | WP_282461589.1 | hypothetical protein | - |
| P3T75_RS10905 (P3T75_10900) | - | 2258351..2259178 (-) | 828 | WP_282461590.1 | phage baseplate upper protein | - |
| P3T75_RS10910 (P3T75_10905) | - | 2259171..2259656 (-) | 486 | WP_282461591.1 | CHAP domain-containing protein | - |
| P3T75_RS10915 (P3T75_10910) | - | 2259669..2262449 (-) | 2781 | WP_282461592.1 | phage tail spike protein | - |
| P3T75_RS10920 (P3T75_10915) | - | 2262446..2263186 (-) | 741 | WP_282461593.1 | phage tail protein | - |
| P3T75_RS10925 (P3T75_10920) | - | 2263186..2265753 (-) | 2568 | WP_282461594.1 | tape measure protein | - |
| P3T75_RS10930 (P3T75_10925) | - | 2266159..2266566 (-) | 408 | WP_282461595.1 | transcriptional regulator | - |
| P3T75_RS10935 (P3T75_10930) | - | 2266567..2266734 (-) | 168 | WP_282461596.1 | hypothetical protein | - |
| P3T75_RS10940 (P3T75_10935) | - | 2266731..2266856 (-) | 126 | WP_282461597.1 | hypothetical protein | - |
| P3T75_RS10945 (P3T75_10940) | - | 2266853..2267035 (-) | 183 | WP_282461598.1 | hypothetical protein | - |
| P3T75_RS10950 (P3T75_10945) | - | 2267235..2267444 (-) | 210 | WP_282461599.1 | hypothetical protein | - |
| P3T75_RS10955 (P3T75_10950) | - | 2267441..2267659 (-) | 219 | WP_282461600.1 | hypothetical protein | - |
| P3T75_RS10960 (P3T75_10955) | - | 2267656..2268003 (-) | 348 | WP_282461601.1 | NUMOD4 domain-containing protein | - |
| P3T75_RS10965 (P3T75_10960) | ssbA | 2268015..2268500 (-) | 486 | WP_282461602.1 | single-stranded DNA-binding protein | Machinery gene |
| P3T75_RS10970 (P3T75_10965) | - | 2268497..2269408 (-) | 912 | WP_282461603.1 | conserved phage C-terminal domain-containing protein | - |
| P3T75_RS10975 (P3T75_10970) | - | 2269436..2270077 (-) | 642 | WP_282461604.1 | putative HNHc nuclease | - |
| P3T75_RS10980 (P3T75_10975) | - | 2270074..2271057 (-) | 984 | WP_282461605.1 | DUF1351 domain-containing protein | - |
| P3T75_RS10985 (P3T75_10980) | - | 2271054..2271770 (-) | 717 | WP_282461606.1 | ERF family protein | - |
| P3T75_RS10990 (P3T75_10985) | - | 2271844..2272362 (-) | 519 | WP_282461607.1 | NUMOD4 domain-containing protein | - |
| P3T75_RS10995 (P3T75_10990) | - | 2272346..2272492 (-) | 147 | WP_282462619.1 | hypothetical protein | - |
| P3T75_RS11000 (P3T75_10995) | - | 2272482..2273189 (-) | 708 | WP_282461608.1 | Rha family transcriptional regulator | - |
| P3T75_RS11005 (P3T75_11000) | - | 2273295..2273483 (+) | 189 | WP_282461609.1 | zinc ribbon domain-containing protein | - |
| P3T75_RS11010 (P3T75_11005) | - | 2273480..2273635 (-) | 156 | WP_282461610.1 | hypothetical protein | - |
| P3T75_RS11015 (P3T75_11010) | - | 2273664..2273813 (-) | 150 | WP_282461611.1 | hypothetical protein | - |
| P3T75_RS11020 (P3T75_11015) | - | 2273844..2274080 (-) | 237 | WP_282461612.1 | helix-turn-helix domain-containing protein | - |
| P3T75_RS11025 (P3T75_11020) | - | 2274238..2274423 (+) | 186 | WP_282461613.1 | hypothetical protein | - |
| P3T75_RS11030 (P3T75_11025) | - | 2274377..2274547 (-) | 171 | WP_282461614.1 | hypothetical protein | - |
| P3T75_RS11035 (P3T75_11030) | - | 2274544..2274741 (-) | 198 | WP_282461615.1 | helix-turn-helix transcriptional regulator | - |
| P3T75_RS11040 (P3T75_11035) | - | 2275126..2275314 (-) | 189 | WP_230711352.1 | helix-turn-helix domain-containing protein | - |
| P3T75_RS11045 (P3T75_11040) | - | 2275590..2275928 (+) | 339 | WP_230711353.1 | helix-turn-helix domain-containing protein | - |
| P3T75_RS11050 (P3T75_11045) | - | 2275932..2276369 (+) | 438 | WP_282461616.1 | ImmA/IrrE family metallo-endopeptidase | - |
| P3T75_RS11055 (P3T75_11050) | - | 2276410..2276724 (+) | 315 | WP_282461617.1 | hypothetical protein | - |
| P3T75_RS11060 (P3T75_11055) | - | 2276857..2278137 (+) | 1281 | WP_282461618.1 | site-specific integrase | - |
| P3T75_RS11065 (P3T75_11060) | - | 2278344..2278589 (+) | 246 | WP_282461619.1 | hypothetical protein | - |
| P3T75_RS11070 (P3T75_11065) | upp | 2278996..2279625 (-) | 630 | WP_173102291.1 | uracil phosphoribosyltransferase | - |
| P3T75_RS11075 (P3T75_11070) | - | 2279686..2281311 (-) | 1626 | WP_282461620.1 | ABC transporter | - |
| P3T75_RS11080 (P3T75_11075) | - | 2281298..2282056 (-) | 759 | WP_230710190.1 | ABC transporter ATP-binding protein | - |
| P3T75_RS11085 (P3T75_11080) | glyA | 2282286..2283536 (-) | 1251 | WP_282461621.1 | serine hydroxymethyltransferase | - |
| P3T75_RS11090 (P3T75_11085) | - | 2283669..2284700 (-) | 1032 | WP_282461622.1 | L-threonylcarbamoyladenylate synthase | - |
| P3T75_RS11095 (P3T75_11090) | prmC | 2284901..2285734 (-) | 834 | WP_282461623.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| P3T75_RS11100 (P3T75_11095) | prfA | 2285727..2286800 (-) | 1074 | WP_206902314.1 | peptide chain release factor 1 | - |
| P3T75_RS11105 (P3T75_11100) | - | 2286880..2287449 (-) | 570 | WP_206902313.1 | thymidine kinase | - |
| P3T75_RS11110 (P3T75_11105) | - | 2287860..2289257 (+) | 1398 | WP_407649846.1 | TrkH family potassium uptake protein | - |
| P3T75_RS11115 (P3T75_11110) | - | 2289627..2290979 (+) | 1353 | WP_206902311.1 | Mur ligase family protein | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 18014.81 Da Isoelectric Point: 5.1951
>NTDB_id=805753 P3T75_RS10965 WP_282461602.1 2268015..2268500(-) (ssbA) [Enterococcus montenegrensis strain CoE-012-22]
MINNVVLVGRLTKDPDLKYTGNGQAVATFTLAVNRNFTNQSGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
NYENQQGQRVYVTEVVAENFQLLESKNSNSSQNTRDTDVSNNQTNNYTRNNQNASQMNLGVNPMNEFGATTIDINDDSLP
F
MINNVVLVGRLTKDPDLKYTGNGQAVATFTLAVNRNFTNQSGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
NYENQQGQRVYVTEVVAENFQLLESKNSNSSQNTRDTDVSNNQTNNYTRNNQNASQMNLGVNPMNEFGATTIDINDDSLP
F
Nucleotide
Download Length: 486 bp
>NTDB_id=805753 P3T75_RS10965 WP_282461602.1 2268015..2268500(-) (ssbA) [Enterococcus montenegrensis strain CoE-012-22]
ATGATTAACAACGTAGTTCTAGTCGGGCGTCTAACTAAAGACCCTGACCTCAAATATACAGGAAACGGTCAAGCAGTCGC
GACCTTTACTTTAGCAGTAAATCGTAATTTCACGAACCAAAGCGGTGAGCGTGAAGCAGATTTTATCAATTGCGTAATCT
GGCGTAAACCAGCTGAAACTTTAGCAAATTATGCCCGCAAAGGAACGCTGCTAGGTGTTACCGGCCGTATTCAAACGCGG
AATTATGAAAATCAGCAAGGTCAGCGCGTATACGTGACAGAAGTTGTTGCGGAGAATTTTCAGTTGCTAGAAAGCAAGAA
TAGTAATTCTAGCCAAAATACACGCGATACAGACGTTTCGAATAATCAAACGAATAATTACACTCGAAACAACCAAAACG
CCTCCCAGATGAATTTAGGAGTAAATCCGATGAATGAATTTGGAGCTACGACAATCGACATCAATGATGATTCACTTCCG
TTTTGA
ATGATTAACAACGTAGTTCTAGTCGGGCGTCTAACTAAAGACCCTGACCTCAAATATACAGGAAACGGTCAAGCAGTCGC
GACCTTTACTTTAGCAGTAAATCGTAATTTCACGAACCAAAGCGGTGAGCGTGAAGCAGATTTTATCAATTGCGTAATCT
GGCGTAAACCAGCTGAAACTTTAGCAAATTATGCCCGCAAAGGAACGCTGCTAGGTGTTACCGGCCGTATTCAAACGCGG
AATTATGAAAATCAGCAAGGTCAGCGCGTATACGTGACAGAAGTTGTTGCGGAGAATTTTCAGTTGCTAGAAAGCAAGAA
TAGTAATTCTAGCCAAAATACACGCGATACAGACGTTTCGAATAATCAAACGAATAATTACACTCGAAACAACCAAAACG
CCTCCCAGATGAATTTAGGAGTAAATCCGATGAATGAATTTGGAGCTACGACAATCGACATCAATGATGATTCACTTCCG
TTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.803 |
100 |
0.621 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.556 |
100 |
0.59 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
62.264 |
65.839 |
0.41 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.717 |
65.839 |
0.36 |