Detailed information NTG0805641

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: P5W77_RS06565
• Genome accession: NZ_CP120424
• Coordinates: 1382888..1383862 (+)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain 32FSE06
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1377888..1388862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5W77_RS06530	rpmG	1378368..1378517 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
P5W77_RS06535	-	1378700..1379251 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
P5W77_RS06540	-	1379252..1380712 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
P5W77_RS06545	-	1380696..1380896 (+)	201	WP_001831138.1	YqgQ family protein	-
P5W77_RS06550	-	1380896..1381882 (+)	987	WP_001831113.1	ROK family glucokinase	-
P5W77_RS06555	-	1381882..1382208 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
P5W77_RS06560	-	1382208..1382831 (+)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
P5W77_RS06565	comGA	1382888..1383862 (+)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
P5W77_RS06570	comGB	1383834..1384901 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
P5W77_RS06575	comGC	1384919..1385236 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
P5W77_RS06580	comGD	1385226..1385663 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
P5W77_RS06585	-	1385650..1385943 (+)	294	WP_001831116.1	hypothetical protein	-
P5W77_RS06590	-	1385867..1386358 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
P5W77_RS06595	-	1386523..1387035 (+)	513	WP_002485736.1	shikimate kinase	-
P5W77_RS06600	gcvT	1387253..1388344 (+)	1092	WP_049392313.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=805641 P5W77_RS06565 WP_001831109.1 1382888..1383862(+) (comGA) [Staphylococcus epidermidis strain 32FSE06]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=805641 P5W77_RS06565 WP_001831109.1 1382888..1383862(+) (comGA) [Staphylococcus epidermidis strain 32FSE06]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701