Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P5V12_RS20650 Genome accession   NZ_CP120416
Coordinates   4797632..4798027 (+) Length   131 a.a.
NCBI ID   WP_316954974.1    Uniprot ID   A0AA96HLD1
Organism   Teredinibacter sp. KSP-S5-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4792632..4803027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5V12_RS20620 (P5V12_20620) pilU 4792673..4793815 (+) 1143 WP_316954969.1 PilT/PilU family type 4a pilus ATPase Machinery gene
  P5V12_RS20625 (P5V12_20625) - 4794020..4794343 (+) 324 WP_316954970.1 hypothetical protein -
  P5V12_RS20630 (P5V12_20630) ruvX 4794356..4794790 (-) 435 WP_316954971.1 Holliday junction resolvase RuvX -
  P5V12_RS20635 (P5V12_20635) - 4794805..4795365 (-) 561 WP_316954972.1 YqgE/AlgH family protein -
  P5V12_RS20640 (P5V12_20640) - 4795523..4796398 (-) 876 WP_316954973.1 energy transducer TonB -
  P5V12_RS20645 (P5V12_20645) gshB 4796413..4797336 (-) 924 WP_316957461.1 glutathione synthase -
  P5V12_RS20650 (P5V12_20650) pilG 4797632..4798027 (+) 396 WP_316954974.1 twitching motility response regulator PilG Regulator
  P5V12_RS20655 (P5V12_20655) pilH 4798069..4798437 (+) 369 WP_316954975.1 twitching motility response regulator PilH -
  P5V12_RS20660 (P5V12_20660) - 4798450..4798992 (+) 543 WP_316954976.1 chemotaxis protein CheW -
  P5V12_RS20665 (P5V12_20665) - 4799173..4801467 (+) 2295 WP_316954977.1 methyl-accepting chemotaxis protein -
  P5V12_RS20670 (P5V12_20670) - 4801490..4802338 (+) 849 WP_316954978.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14354.75 Da        Isoelectric Point: 7.8811

>NTDB_id=805533 P5V12_RS20650 WP_316954974.1 4797632..4798027(+) (pilG) [Teredinibacter sp. KSP-S5-2]
MDVNLEHLKVMIIDDSKTIRRTAETLLKKVGCTVVTATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIEAHVKVAHAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=805533 P5V12_RS20650 WP_316954974.1 4797632..4798027(+) (pilG) [Teredinibacter sp. KSP-S5-2]
ATGGACGTGAACTTAGAACACCTGAAAGTGATGATTATCGACGACAGTAAAACTATTCGTCGAACGGCTGAAACCCTATT
GAAAAAAGTGGGTTGCACCGTGGTCACTGCTACAGACGGTTTTGATGCGTTGGCAAAAATTGCCGATACGCGCCCTGATA
TTATTTTTGTGGACATCATGATGCCCAGGTTGGATGGTTATCAAACCTGTGCATTGATAAAAAACAACAGCGAATTCAAG
TCGACACCAGTCATCATGCTATCCAGTAAAGATGGCTTGTTCGATAAGGCCAAAGGACGAATTGTAGGTTCTGATCAATA
TTTGACTAAACCGTTTAGCAAGGGAGAATTGATCGGTGCGATTGAGGCACATGTTAAGGTCGCGCACGCAAGCTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.8

95.42

0.695
  vicR Streptococcus mutans UA159

42.373

90.076

0.382
  micA Streptococcus pneumoniae Cp1015

40.678

90.076

0.366