Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | P3U44_RS06850 | Genome accession | NZ_CP120180 |
| Coordinates | 1350292..1351194 (+) | Length | 300 a.a. |
| NCBI ID | WP_058611612.1 | Uniprot ID | - |
| Organism | Mammaliicoccus sciuri strain Dog016 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1345292..1356194
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3U44_RS06810 (P3U44_06815) | - | 1345376..1345930 (+) | 555 | WP_058611616.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| P3U44_RS06815 (P3U44_06820) | - | 1345931..1347379 (+) | 1449 | WP_058611615.1 | rhomboid family protein | - |
| P3U44_RS06820 (P3U44_06825) | - | 1347384..1347575 (+) | 192 | WP_078099923.1 | YqgQ family protein | - |
| P3U44_RS06825 (P3U44_06830) | - | 1347572..1348543 (+) | 972 | WP_025904167.1 | ROK family glucokinase | - |
| P3U44_RS06830 (P3U44_06835) | - | 1348543..1348857 (+) | 315 | WP_058611614.1 | MTH1187 family thiamine-binding protein | - |
| P3U44_RS06835 (P3U44_06840) | - | 1348887..1349126 (-) | 240 | WP_016911885.1 | DUF2759 domain-containing protein | - |
| P3U44_RS06840 (P3U44_06845) | - | 1349224..1349856 (+) | 633 | WP_058611613.1 | MBL fold metallo-hydrolase | - |
| P3U44_RS06845 (P3U44_06850) | - | 1349890..1350138 (-) | 249 | WP_025904960.1 | DUF2626 family protein | - |
| P3U44_RS06850 (P3U44_06855) | comGA | 1350292..1351194 (+) | 903 | WP_058611612.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| P3U44_RS06855 (P3U44_06860) | comGB | 1351184..1352224 (+) | 1041 | WP_323706194.1 | competence type IV pilus assembly protein ComGB | - |
| P3U44_RS14185 | - | 1352239..1352304 (+) | 66 | WP_204236796.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| P3U44_RS06860 (P3U44_06865) | - | 1352392..1353591 (-) | 1200 | WP_323706195.1 | site-specific integrase | - |
| P3U44_RS06865 (P3U44_06870) | - | 1353604..1354065 (-) | 462 | WP_204236787.1 | ImmA/IrrE family metallo-endopeptidase | - |
| P3U44_RS06870 (P3U44_06875) | - | 1354081..1354452 (-) | 372 | WP_204236786.1 | hypothetical protein | - |
| P3U44_RS06875 (P3U44_06880) | - | 1354548..1355126 (-) | 579 | WP_323706196.1 | DUF5067 domain-containing protein | - |
| P3U44_RS06880 (P3U44_06885) | - | 1355173..1355784 (-) | 612 | WP_204236784.1 | OB-fold protein | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 34405.30 Da Isoelectric Point: 6.1198
>NTDB_id=804249 P3U44_RS06850 WP_058611612.1 1350292..1351194(+) (comGA) [Mammaliicoccus sciuri strain Dog016]
MEKLFKSIINDAVNSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
MEKLFKSIINDAVNSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
Nucleotide
Download Length: 903 bp
>NTDB_id=804249 P3U44_RS06850 WP_058611612.1 1350292..1351194(+) (comGA) [Mammaliicoccus sciuri strain Dog016]
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTGTCAATTCTAATGCGAGTGATATTCATTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGACTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTGTCAATTCTAATGCGAGTGATATTCATTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGACTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
52.143 |
93.333 |
0.487 |
| comGA | Staphylococcus aureus N315 |
52.143 |
93.333 |
0.487 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
40.58 |
92 |
0.373 |
| pilB | Haemophilus influenzae Rd KW20 |
35.032 |
100 |
0.367 |