Detailed information NTG0804250

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: P3U44_RS06975
• Genome accession: NZ_CP120180
• Coordinates: 1366400..1366894 (+)
• Length: 164 a.a.
• NCBI ID: WP_204236770.1
• Uniprot ID: -
• Organism: Mammaliicoccus sciuri strain Dog016
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1361400..1371894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3U44_RS06945 (P3U44_06950)	bet	1362776..1363555 (+)	780	WP_204236774.1	phage recombination protein Bet	-
P3U44_RS06950 (P3U44_06955)	-	1363545..1364258 (+)	714	WP_323706201.1	MBL fold metallo-hydrolase	-
P3U44_RS06955 (P3U44_06960)	-	1364301..1364615 (+)	315	WP_323706202.1	helix-turn-helix transcriptional regulator	-
P3U44_RS06960 (P3U44_06965)	-	1364631..1365392 (+)	762	WP_107610202.1	DnaD domain protein	-
P3U44_RS06965 (P3U44_06970)	-	1365402..1366196 (+)	795	WP_204236772.1	ATP-binding protein	-
P3U44_RS06970 (P3U44_06975)	-	1366215..1366403 (+)	189	WP_204236771.1	hypothetical protein	-
P3U44_RS06975 (P3U44_06980)	ssbA	1366400..1366894 (+)	495	WP_204236770.1	single-stranded DNA-binding protein	Machinery gene
P3U44_RS06980 (P3U44_06985)	-	1366933..1367091 (+)	159	WP_323706203.1	hypothetical protein	-
P3U44_RS06985 (P3U44_06990)	-	1367076..1367222 (+)	147	WP_323706205.1	hypothetical protein	-
P3U44_RS06990 (P3U44_06995)	-	1367244..1367624 (+)	381	WP_204236768.1	hypothetical protein	-
P3U44_RS06995 (P3U44_07000)	-	1367621..1367845 (+)	225	WP_323706206.1	hypothetical protein	-
P3U44_RS07000 (P3U44_07005)	-	1367858..1368100 (+)	243	WP_037587674.1	hypothetical protein	-
P3U44_RS07005 (P3U44_07010)	-	1368093..1368689 (+)	597	WP_323706208.1	HNH endonuclease signature motif containing protein	-
P3U44_RS07010 (P3U44_07015)	-	1368738..1369208 (+)	471	WP_204236766.1	hypothetical protein	-
P3U44_RS07015 (P3U44_07020)	-	1369217..1369444 (+)	228	WP_204236765.1	DUF3269 family protein	-
P3U44_RS07020 (P3U44_07025)	-	1369516..1370418 (+)	903	WP_323706209.1	DNA cytosine methyltransferase	-
P3U44_RS07025 (P3U44_07030)	-	1370406..1370798 (+)	393	WP_323706210.1	hypothetical protein	-
P3U44_RS07030 (P3U44_07035)	-	1370799..1371200 (+)	402	WP_323706211.1	hypothetical protein	-
P3U44_RS07035 (P3U44_07040)	-	1371187..1371378 (+)	192	WP_323706212.1	hypothetical protein	-
P3U44_RS07040 (P3U44_07045)	-	1371379..1371591 (+)	213	WP_323706214.1	hypothetical protein	-
P3U44_RS07045 (P3U44_07050)	-	1371593..1371739 (+)	147	WP_191835977.1	hypothetical protein	-

Sequence

Protein

• Length: 164 a.a.
• Molecular weight: 18366.07 Da
• Isoelectric Point: 6.3225

>NTDB_id=804250 P3U44_RS06975 WP_204236770.1 1366400..1366894(+) (ssbA) [Mammaliicoccus sciuri strain Dog016]
MINSVTLVGRLTKDPELRTTPSGVEVGNLTLAVNRTFTNQNGERDADFINCIVFRKQAVNVNQYLSKGKLAGIVGRLQTR
SYDNKDGQKVFVTEVVCDNVQFLEPKDSQNGSNSYQNGTSYQKGNNYTQNNQNVQQGQNKAKYDQQNNPFNNGSNFNDDD
LPFD

Nucleotide

• Length: 495 bp

>NTDB_id=804250 P3U44_RS06975 WP_204236770.1 1366400..1366894(+) (ssbA) [Mammaliicoccus sciuri strain Dog016]
ATGATCAATTCTGTAACCCTTGTCGGGCGCCTTACAAAAGACCCTGAACTTAGAACTACTCCGAGTGGCGTTGAAGTAGG
CAACCTCACTTTAGCAGTCAATCGAACATTTACTAATCAAAATGGTGAGCGAGACGCCGACTTCATAAATTGCATTGTAT
TTAGAAAACAAGCCGTAAACGTTAATCAATATTTATCTAAAGGTAAGTTAGCAGGCATAGTTGGACGACTTCAAACGAGA
AGTTACGACAACAAAGACGGACAAAAAGTATTTGTCACTGAAGTTGTTTGCGATAACGTTCAATTCCTAGAGCCTAAAGA
TAGTCAAAACGGCTCAAATTCATATCAAAATGGAACGAGTTATCAAAAGGGTAACAACTATACCCAAAATAATCAAAACG
TCCAACAGGGGCAAAATAAAGCGAAATACGACCAACAAAATAATCCCTTCAACAATGGCAGTAATTTTAACGATGACGAT
TTACCTTTTGACTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	54.651	100	0.573
ssb	Latilactobacillus sakei subsp. sakei 23K	48.824	100	0.506
ssb	Glaesserella parasuis strain SC1401	33.333	100	0.366