Detailed information NTG0803762

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: RJW55_RS00355
• Genome accession: NZ_CP134473
• Coordinates: 63926..64927 (+)
• Length: 333 a.a.
• NCBI ID: WP_043025656.1
• Uniprot ID: -
• Organism: Streptococcus suis strain TMW_SS028
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 58926..69927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW55_RS00340 (RJW55_00340)	-	59649..60422 (+)	774	WP_029179963.1	membrane protein	-
RJW55_RS00345 (RJW55_00345)	-	60425..62137 (+)	1713	WP_043025654.1	ABC transporter ATP-binding protein	-
RJW55_RS00350 (RJW55_00350)	-	62464..63732 (+)	1269	WP_052497006.1	MerR family transcriptional regulator	-
RJW55_RS00355 (RJW55_00355)	ruvB	63926..64927 (+)	1002	WP_043025656.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
RJW55_RS00360 (RJW55_00360)	-	64927..65136 (+)	210	WP_043025657.1	GNAT family N-acetyltransferase	-
RJW55_RS00365 (RJW55_00365)	-	65193..65816 (+)	624	WP_172073093.1	HAD-IA family hydrolase	-
RJW55_RS00370 (RJW55_00370)	comR	65887..66789 (+)	903	WP_043025662.1	helix-turn-helix domain-containing protein	Regulator
RJW55_RS00375 (RJW55_00375)	-	66998..68218 (+)	1221	WP_043025663.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 37655.16 Da
• Isoelectric Point: 4.4673

>NTDB_id=803762 RJW55_RS00355 WP_043025656.1 63926..64927(+) (ruvB) [Streptococcus suis strain TMW_SS028]
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDTITDRALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK

Nucleotide

• Length: 1002 bp

>NTDB_id=803762 RJW55_RS00355 WP_043025656.1 63926..64927(+) (ruvB) [Streptococcus suis strain TMW_SS028]
ATGACAAATCGAATTTTAGATATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCGCAGAAATTAAA
TGAATACATCGGTCAGGACAAGGTTAAGGACCAGCTGAAAATCTTTATCGAAGCAGCCAAGCTCCGTGATGAAGCCTTGG
ATCATACGCTTCTTTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATTGCCAACGAATTGGGGGTCAAC
ATTAAGCAGACCAGTGGTCCTGTTATTGAAAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCCATGGCGGTCGAGGAAATTCTCTACTCTGCTATGGAGGATTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGAGGGCCCGTTTTGGTATTACCGGTCATATGGAGTATTATGAACTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCCGCTATCGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCCAACCGTCTGCTCAAGCGGGTGCGGGATTTTGCACAGATTATGGGCGACGGTCTGATT
GATGACACCATTACGGACAGGGCCTTGACTATGCTGGATGTGGACCGCGAGGGGCTGGACTATGTGGACCAGAAGATTCT
CCGTACCATGATTGAGATGTATGGCGGTGGTCCTGTCGGCCTCAACACTCTGTCGGTCAATATTGCCGAGGAGCGTGAGA
CGGTGGAGGACATGTACGAGCCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACACGGACGGGGCGGGTTGCTACAGCC
AAGGCCTATGAGCACCTGGGCTATCCCTATACGGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (257-326)

• RuvB AAA lid domain (AAA_lid_4) (182-255)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (21-179)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.03	99.399	0.895
ruvB	Streptococcus pneumoniae R6	89.728	99.399	0.892
ruvB	Streptococcus pneumoniae D39	89.728	99.399	0.892
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.589	97.898	0.574
ruvB	Helicobacter pylori 26695	51.064	98.799	0.505
ruvB	Synechocystis sp. PCC 6803	50.479	93.994	0.474