Detailed information NTG0803606

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: P3T85_RS11505
• Genome accession: NZ_CP120140
• Coordinates: 2268539..2269510 (-)
• Length: 323 a.a.
• NCBI ID: WP_025905417.1
• Uniprot ID: A0AAJ4SJJ8
• Organism: Mammaliicoccus sciuri strain Dog035_2
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2270202..2279704	2268539..2269510	flank	692

Gene organization within MGE regions

Location: 2268539..2279704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3T85_RS11505 (P3T85_11505)	ceuB	2268539..2269510 (-)	972	WP_025905417.1	ABC transporter permease	Machinery gene
P3T85_RS11510 (P3T85_11510)	-	2269636..2270052 (-)	417	WP_058612032.1	FixH family protein	-
P3T85_RS11515 (P3T85_11515)	nrdF	2270202..2271173 (-)	972	WP_048539937.1	class 1b ribonucleoside-diphosphate reductase subunit beta	-
P3T85_RS11520 (P3T85_11520)	nrdE	2271202..2273307 (-)	2106	WP_058612033.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	-
P3T85_RS11525 (P3T85_11525)	nrdI	2273270..2273668 (-)	399	WP_025905413.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	-
P3T85_RS11530 (P3T85_11530)	-	2274043..2274927 (+)	885	WP_048539939.1	DMT family transporter	-
P3T85_RS11535 (P3T85_11535)	queF	2274927..2275427 (+)	501	WP_048539940.1	preQ(1) synthase	-
P3T85_RS11540 (P3T85_11540)	-	2275721..2277235 (+)	1515	WP_323708781.1	peptide MFS transporter	-
P3T85_RS11545 (P3T85_11545)	-	2277581..2279083 (+)	1503	WP_323708782.1	peptide MFS transporter	-
P3T85_RS11550 (P3T85_11550)	-	2279123..2279704 (-)	582	WP_048539943.1	5' nucleotidase, NT5C type	-

Sequence

Protein

• Length: 323 a.a.
• Molecular weight: 35476.97 Da
• Isoelectric Point: 10.7243

>NTDB_id=803606 P3T85_RS11505 WP_025905417.1 2268539..2269510(-) (ceuB) [Mammaliicoccus sciuri strain Dog035_2]
MGKFLMRLDVLIILLVIATFFSIFIGVSEVKPLHILNLTDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILLKLLFATLLSLFGTMLFMQILRRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLVSIFRGDHLKNALPHTAVFGALFVMICDVIGRLIIFPYEITIGLTIGVIGSFIFIVLLMKGRSR
NAQ

Nucleotide

• Length: 972 bp

>NTDB_id=803606 P3T85_RS11505 WP_025905417.1 2268539..2269510(-) (ceuB) [Mammaliicoccus sciuri strain Dog035_2]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTGATTATTTTATTAGTAATTGCAACGTTCTTCTCTATATTTATAGGTGT
TTCAGAAGTAAAACCATTACATATATTAAATTTAACAGACGAACAGAAGAACATTTTAGTATCAAGTAGAATTCCAAGAA
CAGTCAGTATTATTATTTCAGGTAGCTCGTTAGCTATTTGTGGACTGATTATGCAACAGCTTACAAGAAATAAATTCGTT
TCTCCAACAACTGCAGGGACAATGGATTGGGCCAGATTAGGTATATTAATTTCTCTTATCGCTTTTCCAGAAGCCAACAT
ACTACTTAAATTATTATTTGCTACATTATTAAGTTTATTTGGAACAATGCTATTCATGCAAATTCTCCGTAGAATTCAAT
TTAAAGATGTTATTTTTATACCATTAGTTGGTATTATGCTCGGAAACATAGTGTCAAGTTTTTCATCTTTTGTTGCATTA
CGTACAAATGCTGTACAAAGTATTGGTAATTTTATGCAAGGTAATTTCTCAATTATTACAAGCGGTAGATATGAAATTCT
TTATATTAGTATTCCGTTATTGATTTTAGCATTTATATTTGCGAATCAATTTACGATTGCTGGTATGGGTAAAGATTTTA
GTGTGAATTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGACTGATTATTGCCTCAATCATTACGGCACTTGTTGTT
GTAACAGTTGGTATGATGCCATTCTTAGGTTTAATTATTCCTAACTTAGTTTCAATATTCAGAGGAGATCATTTAAAAAA
TGCATTGCCGCATACAGCTGTATTTGGTGCATTGTTTGTTATGATTTGTGATGTAATAGGTCGATTAATTATATTCCCTT
ATGAAATTACAATTGGTTTAACAATTGGTGTGATTGGTAGTTTCATATTTATAGTATTGCTGATGAAAGGACGTTCAAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (14-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	51.104	98.142	0.502