Detailed information NTG0802695

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: RI578_RS26435
• Genome accession: NZ_CP134203
• Coordinates: 5758242..5759528 (+)
• Length: 428 a.a.
• NCBI ID: WP_121747006.1
• Uniprot ID: A0ABP9SU29
• Organism: Streptomyces sp. BB1-1-1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5753242..5764528

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI578_RS26405 (RI578_26405)	-	5754087..5754281 (+)	195	WP_055416925.1	hypothetical protein	-
RI578_RS26420 (RI578_26420)	tig	5754919..5756325 (+)	1407	WP_310873401.1	trigger factor	-
RI578_RS26425 (RI578_26425)	clpP	5756650..5757255 (+)	606	WP_193776311.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RI578_RS26430 (RI578_26430)	clpP	5757380..5758060 (+)	681	WP_310873402.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RI578_RS26435 (RI578_26435)	clpX	5758242..5759528 (+)	1287	WP_121747006.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
RI578_RS26440 (RI578_26440)	-	5759602..5760573 (-)	972	WP_310873403.1	hypothetical protein	-
RI578_RS26445 (RI578_26445)	-	5760710..5763334 (+)	2625	WP_310873404.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46740.52 Da
• Isoelectric Point: 4.7360

>NTDB_id=802695 RI578_RS26435 WP_121747006.1 5758242..5759528(+) (clpX) [Streptomyces sp. BB1-1-1]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLDGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEGRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=802695 RI578_RS26435 WP_121747006.1 5758242..5759528(+) (clpX) [Streptomyces sp. BB1-1-1]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTCTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTGGCGGAGACCA
GCGAGGTGCGCTGGGAGGAGCTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGACGGGTACGTCGTCGGCCAGGAGGCC
GCCAAGAAGGCGCTCTCCGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTGGCGCGCATGCTGAACGTCCCCTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCCGGTTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCGTCGATCACGCGCGACGTCAGCGGCGAAGGCGTCCAGCAGGCGC
TGCTGAAGATCCTCGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCGGTCATCACCTCGGTCCACAACCTCGACCGC
GAGGCCCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCCTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCGACGCTGATCCCGCGGGATTCGCGGGGGCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523