Detailed information NTG0797326

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: RBB55_RS13435
• Genome accession: NZ_CP132915
• Coordinates: 2790364..2791368 (+)
• Length: 334 a.a.
• NCBI ID: WP_377802802.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A207
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2785364..2796368

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBB55_RS13425 (RBB55_13450)	-	2788324..2789664 (+)	1341	WP_000437078.1	deoxyguanosinetriphosphate triphosphohydrolase	-
RBB55_RS13430 (RBB55_13455)	ruvA	2789756..2790355 (+)	600	WP_377802801.1	Holliday junction branch migration protein RuvA	-
RBB55_RS13435 (RBB55_13460)	ruvB	2790364..2791368 (+)	1005	WP_377802802.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
RBB55_RS13440 (RBB55_13465)	-	2791573..2792079 (+)	507	Protein_2630	amidohydrolase	-
RBB55_RS13450 (RBB55_13475)	-	2793359..2794192 (+)	834	Protein_2632	amidohydrolase	-
RBB55_RS13455 (RBB55_13480)	ybgC	2794403..2794810 (+)	408	WP_001273591.1	tol-pal system-associated acyl-CoA thioesterase	-
RBB55_RS13460 (RBB55_13485)	tolQ	2794833..2795531 (+)	699	WP_002125336.1	protein TolQ	-
RBB55_RS13465 (RBB55_13490)	tolR	2795531..2795983 (+)	453	WP_377802803.1	protein TolR	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36841.13 Da
• Isoelectric Point: 4.7936

>NTDB_id=797326 RBB55_RS13435 WP_377802802.1 2790364..2791368(+) (ruvB) [Acinetobacter baumannii strain A207]
MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNL
KSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTR
AGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVN
HEMAQRALDMLNVDKAGLDTLDRRYLIMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQ
SYLQFGMTPPEPKN

Nucleotide

• Length: 1005 bp

>NTDB_id=797326 RBB55_RS13435 WP_377802802.1 2790364..2791368(+) (ruvB) [Acinetobacter baumannii strain A207]
ATGCAAGACCGTCTAATCAGTGGAACAGAAAAACCTGAAGATCATTTTGATCGGGCTATTCGACCGACTTCACTTGCCGA
TTATATCGGGCAACCAGTCGTACGCGAGCAAATGGAAATTTTCATCGGTGCGGCTCGTGGTCGTGGTGAAGCACTCGATC
ACACACTGATTTTCGGTCCACCGGGCTTAGGAAAAACCACGCTTGCCAATATTATTGCGCGTGAAATGGGTGGCAATCTC
AAATCCACTTCAGGGCCTGTTTTAGAGCGTGCGGGTGATTTGGCTGCAATGCTGACTAACCTTGAAGAAGGCGATGTTTT
ATTTATTGATGAAATTCACCGTCTTTCACCAGTGATTGAAGAAATTCTGTATCCGGCAATGGAAGATTACCAACTTGATA
TCATGATTGGTGAAGGTCCTGCTGCTCGTTCAATTAAACTCGATTTACCACCTTTTACGCTCGTTGCTGCGACCACACGT
GCCGGCTTACTCACCTCGCCTCTACGTGACCGTTTCGGTATTGTGCAACGTCTTGAATTCTATTCTGTAGAAGACCTAAC
TCACATCGTGTCACGATCTGCAAACCTCATGGATGTACCCATTACAGTTGAGGGTGCAGAAGAAGTTGCACGCCGTTCAC
GCGGAACACCGCGTATTGCCAATCGTTTATTACGCCGTGTACGTGACTATGCACAAGTAAAAGGTACGGGCGAAGTTAAC
CATGAAATGGCACAACGTGCGCTTGATATGCTTAATGTCGATAAAGCTGGTTTAGATACCTTAGACCGACGTTATTTAAT
TATGCTGTTAGAACGTTTTGATGGTGGACCTGCTGGTGTTGAAGCCCTTGCAGCTGCTATGGCTGAAGATAGTGGAACAC
TTGAAGATGTTATTGAACCTTATTTAATTCAGCAAGGTTATGTTATGCGTACTGCACGAGGTCGCATTGCAACCAACCAA
TCTTATTTGCAGTTTGGCATGACGCCACCTGAGCCTAAAAACTAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-322)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	57.704	99.102	0.572
ruvB	Synechocystis sp. PCC 6803	57.325	94.012	0.539
ruvB	Streptococcus pneumoniae TIGR4	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae R6	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae D39	56.113	95.509	0.536
ruvB	Helicobacter pylori 26695	54.605	91.018	0.497