Detailed information NTG0795665

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: Q9256_RS03860
• Genome accession: NZ_CP132214
• Coordinates: 794696..795814 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 2022CK-00066
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 789696..800814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q9256_RS03830 (Q9256_03830)	-	790525..791373 (+)	849	WP_000336548.1	class II glutamine amidotransferase	-
Q9256_RS03835 (Q9256_03835)	-	791626..792081 (+)	456	WP_000782976.1	bacteriohemerythrin	-
Q9256_RS03840 (Q9256_03840)	-	792234..793301 (+)	1068	WP_002019572.1	hypothetical protein	-
Q9256_RS03845 (Q9256_03845)	-	793301..793624 (+)	324	WP_000442587.1	RnfH family protein	-
Q9256_RS03850 (Q9256_03850)	-	793679..794077 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
Q9256_RS03855 (Q9256_03855)	fur	794189..794626 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
Q9256_RS03860 (Q9256_03860)	pilU	794696..795814 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
Q9256_RS03865 (Q9256_03865)	pilT	795842..796879 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
Q9256_RS03870 (Q9256_03870)	-	797006..797698 (+)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=795665 Q9256_RS03860 WP_000347039.1 794696..795814(-) (pilU) [Acinetobacter baumannii strain 2022CK-00066]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=795665 Q9256_RS03860 WP_000347039.1 794696..795814(-) (pilU) [Acinetobacter baumannii strain 2022CK-00066]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395