Detailed information NTG0794404

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: Q8W10_RS14560
• Genome accession: NZ_CP131950
• Coordinates: 2977466..2978584 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 2023CK-00127
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2972466..2983584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q8W10_RS14550 (Q8W10_14565)	-	2975582..2976274 (-)	693	WP_305738002.1	YggS family pyridoxal phosphate-dependent enzyme	-
Q8W10_RS14555 (Q8W10_14570)	pilT	2976401..2977438 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
Q8W10_RS14560 (Q8W10_14575)	pilU	2977466..2978584 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
Q8W10_RS14565 (Q8W10_14580)	fur	2978654..2979091 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
Q8W10_RS14570 (Q8W10_14585)	-	2979203..2979601 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
Q8W10_RS14575 (Q8W10_14590)	-	2979656..2979979 (-)	324	WP_000442587.1	RnfH family protein	-
Q8W10_RS14580 (Q8W10_14595)	-	2979979..2981046 (-)	1068	WP_002019572.1	hypothetical protein	-
Q8W10_RS14585 (Q8W10_14600)	-	2981199..2981654 (-)	456	WP_000782976.1	bacteriohemerythrin	-
Q8W10_RS14590 (Q8W10_14605)	-	2981907..2982755 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=794404 Q8W10_RS14560 WP_000347039.1 2977466..2978584(+) (pilU) [Acinetobacter baumannii strain 2023CK-00127]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=794404 Q8W10_RS14560 WP_000347039.1 2977466..2978584(+) (pilU) [Acinetobacter baumannii strain 2023CK-00127]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395