Detailed information NTG0793712

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: PWW23_RS15665
• Genome accession: NZ_CP118586
• Coordinates: 3330915..3334301 (+)
• Length: 1128 a.a.
• NCBI ID: WP_069687461.1
• Uniprot ID: -
• Organism: Vibrio harveyi strain fish6
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3325915..3339301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWW23_RS15640	erpA	3326256..3326597 (-)	342	WP_005449174.1	iron-sulfur cluster insertion protein ErpA	-
PWW23_RS15645	hemL	3326844..3328139 (+)	1296	WP_005449175.1	glutamate-1-semialdehyde 2,1-aminomutase	-
PWW23_RS15650	-	3328499..3329584 (+)	1086	WP_005449176.1	AI-2E family transporter	-
PWW23_RS15655	rsmC	3329661..3330686 (+)	1026	WP_009698733.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
PWW23_RS15660	-	3330683..3330916 (-)	234	WP_029790366.1	hypothetical protein	-
PWW23_RS15665	chiS	3330915..3334301 (+)	3387	WP_069687461.1	response regulator	Regulator
PWW23_RS15670	-	3335122..3336804 (+)	1683	WP_005446317.1	ABC transporter substrate-binding protein	-
PWW23_RS15675	-	3336975..3337961 (+)	987	WP_005446316.1	ABC transporter permease	-
PWW23_RS15680	-	3337964..3338989 (+)	1026	WP_005446315.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127368.10 Da
• Isoelectric Point: 5.3872

>NTDB_id=793712 PWW23_RS15665 WP_069687461.1 3330915..3334301(+) (chiS) [Vibrio harveyi strain fish6]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQQRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKDTALGHTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQEEIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWAIVVQLPEKEAFARVHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLAGATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLANEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=793712 PWW23_RS15665 WP_069687461.1 3330915..3334301(+) (chiS) [Vibrio harveyi strain fish6]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCGTTTTTGGTTCTTAGTATCAC
GCCACTGACGATAACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTTCAAGAACAAAGCACATCGCACCTTCTTT
CAGTTCGTGATACCAAACAACAACAAATCATCGACTACTTTGCAGCTCAAGAGACTGAAGTCATGGGCTTCGTACGCTCC
GAACTTGCTTACGCCAGCGGCGGACGATTCTACGGTTTGGTCAATGCGTTTAGTCGCTTGGGTCACGATATTGATGAAGC
CAGAGAAAACGCACAGCAGCGCTATATCAAAGGCAGTGGCGATCAAATCAAAACCTCGATTTTACCGGAATCATCTAACT
ACGTTGGCAGCGAACGTTACCGCCTATTGCACAAACGTTACCACTGGGCATACCTAGAGCTGTTAAAGCGATCTGATTTT
AATGACATTTTATTGGTTGATATCGATGGTAATGTCACTTACTCAATCAATAAAGACGACAACTATGGCACTAACCTACT
GACAGGACGCTACAAAGATACGGCGCTAGGGCACACCTTTAAACGTTTGTCTGAAGATGTGAGTGCACGTCGTAAGGTTA
ATGAAGATTACACGCCAGTTGTCGTGTCTGACTTTGATATCGAAAACGGTAAACAAGTCGCTTGGCTCGGCGCACCGATT
GTCCAACAAGGCTACCTGCACAGCTATGCGATGTTCCGCTTACCAAACAACGGCATTACTAAGCTTATTGCTGAAATCAA
CCGCGATTCCTCGATTGAAACCTTACTAGTGGGCAGCGATCATAAACCTCGAACCATTAACACCAAACAGGAAGAAATCC
AAAACAGCTTAGAGATTGTCGATAAAGCACTCGCAGGCGACACAGAAGTAGGTACTTACAGCAACCGCTTGGGTGAAGAG
ATGATTGCGGCATTTGCGCCAATTGAAACTCGCGGTCTAACTTGGGCGATTGTCGTACAACTTCCAGAAAAAGAAGCCTT
TGCTCGAGTCCACCAGCTCGAGAAGCTGTTTGTTATTGCGATGCTGATTGCGATCATCTTGGTTGTGATCGCCTCACACT
ACTTATCTAATTTCATCACCTCCCCGCTTCTTAAGCTGACTTGGGCAGCAGAGAAAGTATCTGCTGGTGATCTGGACGAA
ACGACCTTTAATACAGAGCGTAAAGATGAAATCGGTCGACTCGCGATCAGCTTTGAGCGCATGCAACGCTCAATTCGAGA
AAAGATCCAAACCATTAAACAGCAAAATGAAGAGCTAGAAAGCAACATCAAATTGATCCAAAAGCAAAACGAAGAATTGC
AGTTGGCAGATAAGCTGAAAGATGAGTTCCTAGCGACAACCTCTCACGAGTTACGTACACCATTACACGGTATGGTCGGC
ATTGCAGAGACTTTAGTATCTGGTGCTAATGGTGCAATTCCTGCGAGTCAAAAATACCAATTGGATATCATCATCAAAAG
TGGTCAACGTTTGGCAAATCTTGTTGACGATTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAAT
CGGCAGTGAGCCTAGCAGGTGCGACTCGCTTAGTGCTTGAGCTTTCAAGTCATCTACTAGGTAACAAGACGATTCGTATC
ATTAACCAGGTCCCTGCCGATCTAAAAGCGGTGTCTGCCGATCCACAACGCTTGGAACAAGTACTGTACAACCTAATTGG
TAATGCAATTAAATATACTTCTGAAGGTAAGATCGTAATTTCTGCCACCGTCGTGGACGATCAAGTCCGCGTACAAGTGG
TTGATACTGGCCAGGGGATCCCGGCTGAACATCTTGAGCATATCTTTGAACCTTTAATTCAAGCCGGTCAAGACGCTAGT
CGCTACCGTCAAGGCGCTGGTTTGGGTTTATCAATCAGCCGTCAACTTATCGAATTGATGGGTGGTTCGTTATATGTAAG
TAGTCAACCAATGGTCGGCACTACATTTAGCTTTACTCTGCCACTTGCTAATGAAGAAGAGATTCAAGCAACACAGAGCC
TTGCGGCGCGTGGACACTTCCAAATTCCAGAAGCGAACTTTGAAAACAACGACGACTTATCATTACCAGAGAACCCTGAT
GGTCCGCTGTTGTATGTTGCTGATGACGAACCGGTTAACTTACGCGTTCTTGAAAGCTTCCTAAGGCTTGAAGGCTACCG
CGTACGCACTATTTCTGATGGTCCTGAAACACTTGCTTTAATCGAGCAAGAAAAACCAGAGTTGCTTCTACTCGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTATGTAGTGAGCTTAGAGAGACCTATGATCACGCAGAGCTTCCAATCATTATG
TTGACAGCATTAAGTCAGACAGAAGATCGAGTAAGAGGCTTCGAAGCAGGTGCGAATGACTACTTAACCAAGCCATTCAA
TAAGCAGGAACTCGCCGCACGTATTCAAGCGCACTTAACCGCAAGTAAAGCAGAAATGCGCCACATCGAGAACAAGTTAC
TGGAATCGGAGCTGCGCCAACGTGCTGAAGTAGAAGCTAGCTTGCTTGAGACTCAAGGTCGATTATTAGAACAACTAGAA
TCAGCACCTGAAGCCATTATTTGCCTTCGCGAGGATCAACGTATTCGCTTTGCGAACGAAGCGGCATGCAAGCTATTTAA
ACGCAGCTTAGAGCAGTTAAAACGCTCTTCGGCAGATGAACTTATTGCACCTAAATTCCTGACAGTTAAACAACCACATT
ACTGTGGCAAGATTGATATTTACATCGAAGATATTCGTCAAAACATTGAAGCAGACATTCTTAAATTACCTGAAGGCTCT
GGTCTAGATGTTATGTACATCTTTAACGTAGGCGGTGGTGCAAACGCAGCTCGTATCCACAATCTAGAAACCGCGGTTGA
AGTTCTATCAAGTTATGCGTTTGACGGTGATAAAGACCAATTGCAGAAGCTAAAAGAACTTGGCGGTGAGTTTACTCGCC
TTGCAGATAAAGCATTGGGGAACAAGAAAGATAAACAAGAGCTGATGCGCGAAGTATTGGTCGATACGATGACTCATGCA
TTGGAATACTGGGAATCAGTGACTGGAGAAACTAAGTTTGCTTTTGCGGAGCAAAGTGGTTTATGGCGTGTCTACCTCGA
CCGCAGTACGTTGCAAACTCGGACACTCGATAAATACATGCGCATTGAGACATTACCAAAAACACCGCGCTGGAGAACGG
TTCTAAGCTCAATCGAGTTCATTCTTGAGCACTGTAAAGAACAAAGCCCTGAACGAGCTTACATTGAAGCGCAACGCGAT
AAAATGCAAAGGCTCCTTACAAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.705	100	0.768