Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   Q7572_RS02220 Genome accession   NZ_CP131878
Coordinates   472947..474992 (-) Length   681 a.a.
NCBI ID   WP_004884596.1    Uniprot ID   A0AA36NZE8
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 467947..479992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS02185 (Q7572_02190) - 468424..469107 (+) 684 WP_002049738.1 outer membrane lipid asymmetry maintenance protein MlaD -
  Q7572_RS02190 (Q7572_02195) - 469134..469775 (+) 642 WP_002049753.1 ABC transporter substrate-binding protein -
  Q7572_RS02195 (Q7572_02200) - 469787..470074 (+) 288 WP_000250997.1 STAS domain-containing protein -
  Q7572_RS02200 (Q7572_02205) - 470148..471161 (-) 1014 WP_002049699.1 CorA family divalent cation transporter -
  Q7572_RS02205 (Q7572_02210) - 471319..471900 (+) 582 WP_002049746.1 TIGR00730 family Rossman fold protein -
  Q7572_RS02210 (Q7572_02215) - 471915..472316 (+) 402 WP_004884602.1 NUDIX domain-containing protein -
  Q7572_RS02215 (Q7572_02220) comF 472319..472954 (-) 636 WP_151276927.1 phosphoribosyltransferase family protein Machinery gene
  Q7572_RS02220 (Q7572_02225) recG 472947..474992 (-) 2046 WP_004884596.1 ATP-dependent DNA helicase RecG Machinery gene
  Q7572_RS02225 (Q7572_02230) - 475013..475828 (+) 816 WP_004884592.1 NAD(P)H-binding protein -
  Q7572_RS02230 (Q7572_02235) adeT2 475907..476893 (+) 987 WP_004711792.1 putative multidrug efflux protein AdeT2 -
  Q7572_RS02235 (Q7572_02240) plsB 476936..479509 (-) 2574 WP_004884590.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76462.03 Da        Isoelectric Point: 7.7108

>NTDB_id=793678 Q7572_RS02220 WP_004884596.1 472947..474992(-) (recG) [Acinetobacter nosocomialis strain 2014S01-097]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQPKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILSDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARTQAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLNRIATNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQSVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=793678 Q7572_RS02220 WP_004884596.1 472947..474992(-) (recG) [Acinetobacter nosocomialis strain 2014S01-097]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTACTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTGGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAGCTCATTAATGAGCATACGC
CTCTACCCAAAACGCAGCTCACGGCAATTTACCCAAGTACTGATGGTTTAACGCAACCTAAATTACGTGAATATGTTAAA
CAGGCGTTGAAGCATCATAGTGATGCTCTACCTGAGCTGCTTCCTAAACAATATACAAATGGATACGCACTCAAAGAAGC
CCTACATTACATTCATGAGCCACCTGTCGATGCCAATATGATTCAATTGGCCCAAGGGTCTCATCCTGCTCAGCAACGCC
TTATTTTTGAAGAGTTGGTCGCACATCAAATTAGTCTTCTCACACGACGTGCTTATATTCGTCAAATTGCCTCACCTGCT
TTCCCAAGCAGCAAAGTACTTGCGAAAAAACTCTTAGAAGCTCTTCCCTTTCAAATGACCAACGCACAAAAGCGTGTATC
AAAAGAAATTTTAAGCGACTTAAAACAACACCAACCGATGTTACGCTTGGTACAAGGTGATGTAGGTGCAGGTAAAACTT
TAGTCGCGGCAGTTGCTGCATGTCACGCCTTAGAAGCAGATTGGCAAGTTGCCTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAGCGCTGGTTTGAACCTTTAGGTATTACAGTAGCTTGGCTGTCAGGCAAACAAAAAGG
TAAAGCACGAACACAAGCTGAACAACAAATCAAAGAAGGCCATGCCGAGCTTATTGTAGGTACGCATGCTTTGTTTCAAG
ATAATGTTGAGTTTGCCAAACTAGGACTCGTGATTATTGATGAGCAGCACCGCTTTGGGGTGGATCAACGATTAGCCTTA
CGCAACAAAGGCGCAGAACAACTCACACCACATCAACTCGTCATGACTGCTACGCCAATTCCTAGAACATTAGCAATGAG
TGCTTATGGCGATTTGGATACATCGATTATTGATGAATTGCCGCCAGGCCGAACTCCAATTCAGACCGTCACAATTCCGC
TAGATCGTCGTGAAGAAGTGCTAAATCGAATTGCTACAAATTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCTGCAGAAGCCACTTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCTGATGAAAAGCAATCTGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TGCTAATTGCAACAACTGTTATTGAGGTTGGGGTAGATGTACCTAATGCCTCAATTATGGTCATTGAAAATGCTGAACGC
TTAGGTCTTTCACAACTACACCAATTACGAGGTCGAGTCGGACGAGGTGCAAAGGCTAGTTTTTGTGTTCTTCTCTATAA
ACCCCCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAACGACGGCTTTGTCATTGCTGAAAAAG
ACCTTGAATTACGAGGTCCGGGTGAATTATTAGGAACAAAACAGACAGGTGATATGGGCTTCCGTGTCGCACGTTTAGAA
CGAGATGATCATTTACTGAGTCAAGCGCATTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGACGCCCT
CTTGAAACGGTGGCTGCCTGAAGCACCTCGATACGCTTATGTTTAA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(261-422)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

RecG wedge domain (RecG_wedge)

(7-163)

Helicase conserved C-terminal domain (Helicase_C)

(466-576)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36NZE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

50.075

98.238

0.492
  recG/mmsA Streptococcus pneumoniae R6

41.353

97.651

0.404
  recG/mmsA Streptococcus pneumoniae R36A

41.353

97.651

0.404
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389